Miyakogusa Predicted Gene
- Lj4g3v2225630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2225630.1 CUFF.50539.1
(564 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58875 1118 0.0
gnl|LJGI|GO031609 homologue to UniRef100_Q0D7H8 Cluster: Os07g02... 1065 0.0
gnl|LJGI|TC58251 494 e-139
gnl|LJGI|TC76539 similar to UniRef100_A7Q5W1 Cluster: Chromosome... 210 7e-54
gnl|LJGI|FS355001 196 1e-49
gnl|LJGI|AV414989 113 1e-24
>gnl|LJGI|TC58875
Length = 941
Score = 1118 bits (564), Expect = 0.0
Identities = 564/564 (100%)
Strand = Plus / Plus
Query: 1 atggaggaagttaacgtggtggaaaccaaggatggaactgtttcagtggctactgctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atggaggaagttaacgtggtggaaaccaaggatggaactgtttcagtggctactgctttt 228
Query: 61 gctggtcaccaggaagctgtgcaggatagagaccacaaatttttaggaaaagcggttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gctggtcaccaggaagctgtgcaggatagagaccacaaatttttaggaaaagcggttgaa 288
Query: 121 gaagcatacaaaggggtagattgtggacatggaggcccttttggtgctgtaattgttcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaagcatacaaaggggtagattgtggacatggaggcccttttggtgctgtaattgttcgt 348
Query: 181 aatgacgaagtagttgttagttgtcacaacatggttctgaatcacactgaccctactgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatgacgaagtagttgttagttgtcacaacatggttctgaatcacactgaccctactgct 408
Query: 241 catgcagaggtgacagcaataagagaggcctgtaagaagcttaaccagatagagctttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 catgcagaggtgacagcaataagagaggcctgtaagaagcttaaccagatagagctttca 468
Query: 301 gattgtgaaatatatgcttcttgtgaaccttgccccatgtgctttggtgcaatccacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gattgtgaaatatatgcttcttgtgaaccttgccccatgtgctttggtgcaatccacctt 528
Query: 361 tctcgaattaagaggttggtttatggagcgaaggctgaggcagcaattgctattgggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tctcgaattaagaggttggtttatggagcgaaggctgaggcagcaattgctattgggttt 588
Query: 421 gatgattttattgcggatgcattgcgaggtactggattctatcagaaagctcagttggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gatgattttattgcggatgcattgcgaggtactggattctatcagaaagctcagttggag 648
Query: 481 attaaaagagctgatggtaatggggccctcattgcagaagaggttttccagaaaacaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 attaaaagagctgatggtaatggggccctcattgcagaagaggttttccagaaaacaaag 708
Query: 541 gaaaagttccaaatgtactagatc 564
||||||||||||||||||||||||
Sbjct: 709 gaaaagttccaaatgtactagatc 732
>gnl|LJGI|GO031609 homologue to UniRef100_Q0D7H8 Cluster: Os07g0245100 protein; n=2;
Oryza sativa|Rep: Os07g0245100 protein - Oryza sativa
subsp. japonica (Rice), partial (94%)
Length = 697
Score = 1065 bits (537), Expect = 0.0
Identities = 547/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 16 gtggtggaaaccaaggatggaactgtttcagtggctactgcttttgctggtcaccaggaa 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gtggtggaaaccaaggatggaactgtttcagtggctactgcttttgctggtcaccaggaa 189
Query: 76 gctgtgcaggatagagaccacaaatttttaggaaaagcggttgaagaagcatacaaaggg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gctgtgcaggatagagaccacaaatttttaggaaaagcggttgaagaagcatacaaaggg 249
Query: 136 gtagattgtggacatggaggcccttttggtgctgtaattgttcgtaatgacgaagtagtt 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtagattgtggacatggaggcccttttggtgctgtaattgttcgtaatgacgaagtagtt 309
Query: 196 gttagttgtcacaacatggttctgaatcacactgaccctactgctcatgcagaggtgaca 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttagttgtcacaacatggttctgaatcacactgaccctactgctcatgcagaggtgaca 369
Query: 256 gcaataagagaggcctgtaagaagcttaaccagatagagctttcagattgtgaaatatat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gcaataagagaggcctgtaagaagcttaaccagatagagctttcagattgtgaaatatat 429
Query: 316 gcttcttgtgaaccttgccccatgtgctttggtgcaatccacctttctcgaattaagagg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gcttcttgtgaaccttgccccatgtgctttggtgcaatccacctttctcgaattaagagg 489
Query: 376 ttggtttatggagcgaaggctgaggcagcaattgctattgggtttgatgattttattgcg 435
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 490 ttggtttatggagcgaaggctgaggcagcaatcgctattgggtttgatgattttattgcg 549
Query: 436 gatgcattgcgaggtactggattctatcagaaagctcagttggagattaaaagagctgat 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gatgcattgcgaggtactggattctatcagaaagctcagttggagattaaaagagctgat 609
Query: 496 ggtaatggggccctcattgcagaagaggttttccagaaaacaaaggaaaagttccaaatg 555
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 610 ggtaatggggccctcattgcagaagaggttttccagaaaacaaa-gaaaagttccaaatg 668
Query: 556 tactagatc 564
|||||||||
Sbjct: 669 tactagatc 677
>gnl|LJGI|TC58251
Length = 786
Score = 494 bits (249), Expect = e-139
Identities = 474/549 (86%)
Strand = Plus / Plus
Query: 1 atggaggaagttaacgtggtggaaaccaaggatggaactgtttcagtggctactgctttt 60
||||| ||||| || |||||| | || ||| ||||||||||| |||| || |||| |||
Sbjct: 70 atggaagaagtgaatgtggtgcagactaagaatggaactgttgcagtagcatctgcattt 129
Query: 61 gctggtcaccaggaagctgtgcaggatagagaccacaaatttttaggaaaagcggttgaa 120
||||| || ||||||||| | |||||||||||||||||||||||| |||| || ||| |
Sbjct: 130 gctggccatcaggaagctatacaggatagagaccacaaatttttaagaaaggccattgga 189
Query: 121 gaagcatacaaaggggtagattgtggacatggaggcccttttggtgctgtaattgttcgt 180
|||||||| | |||| |||| | || | ||||||| |||||||||||||| || ||| ||
Sbjct: 190 gaagcatatacagggatagaatatgaagatggaggaccttttggtgctgttatagtttgt 249
Query: 181 aatgacgaagtagttgttagttgtcacaacatggttctgaatcacactgaccctactgct 240
||||| |||||||||| ||||||||||||||||||||||| ||| ||| || ||||||
Sbjct: 250 aatgatgaagtagttgctagttgtcacaacatggttctgaggaacaatgatccaactgct 309
Query: 241 catgcagaggtgacagcaataagagaggcctgtaagaagcttaaccagatagagctttca 300
||||| || || ||||| ||||||||||| ||||||||||| || |||||||| ||||||
Sbjct: 310 catgctgaagtcacagctataagagaggcttgtaagaagctaaatcagatagaactttca 369
Query: 301 gattgtgaaatatatgcttcttgtgaaccttgccccatgtgctttggtgcaatccacctt 360
|| ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 370 gaatgtgaaatatactcttcttgtgaaccttgtccaatgtgctttggtgcaatccacctt 429
Query: 361 tctcgaattaagaggttggtttatggagcgaaggctgaggcagcaattgctattgggttt 420
|| ||| ||||||||||||||||||| || ||||| |||||||||||||| |||||||||
Sbjct: 430 tcacgagttaagaggttggtttatggtgcaaaggcagaggcagcaattgcaattgggttt 489
Query: 421 gatgattttattgcggatgcattgcgaggtactggattctatcagaaagctcagttggag 480
|||||||||||||| ||||||||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 490 gatgattttattgctgatgcattgagaggcactgggttctaccagaaagcatgcttggag 549
Query: 481 attaaaagagctgatggtaatggggccctcattgcagaagaggttttccagaaaacaaag 540
||||||||||||||||| |||| |||| ||||||| ||||| ||||| |||||||||||
Sbjct: 550 attaaaagagctgatggcaatgaggccatcattgctgaagaagtttttcagaaaacaaaa 609
Query: 541 gaaaagttc 549
|||||||||
Sbjct: 610 gaaaagttc 618
>gnl|LJGI|TC76539 similar to UniRef100_A7Q5W1 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 664
Score = 210 bits (106), Expect = 7e-54
Identities = 331/406 (81%)
Strand = Plus / Plus
Query: 62 ctggtcaccaggaagctgtgcaggatagagaccacaaatttttaggaaaagcggttgaag 121
||||||| || |||||| | ||||||||||| ||||| ||| || |||||| |||||||
Sbjct: 256 ctggtcatcaagaagctatacaggatagagatcacaagtttgtaacaaaagcagttgaag 315
Query: 122 aagcatacaaaggggtagattgtggacatggaggcccttttggtgctgtaattgttcgta 181
||||||| |||||||| || ||||| ||||||| || |||||||| || |||||||| |
Sbjct: 316 aagcatataaaggggttgaatgtggtgatggaggtccatttggtgcggtcattgttcgaa 375
Query: 182 atgacgaagtagttgttagttgtcacaacatggttctgaatcacactgaccctactgctc 241
|||| ||||||||||| || ||||| ||||||||| ||| | ||||| |||||||| |
Sbjct: 376 atgatgaagtagttgtaagctgtcataacatggttttgagaaatactgatcctactgccc 435
Query: 242 atgcagaggtgacagcaataagagaggcctgtaagaagcttaaccagatagagctttcag 301
|||| ||||| || || ||||||||||| ||| | ||||| || || || || ||| | |
Sbjct: 436 atgctgaggttactgctataagagaggcttgtcaaaagctgaatcaaattgaacttgctg 495
Query: 302 attgtgaaatatatgcttcttgtgaaccttgccccatgtgctttggtgcaatccaccttt 361
| || || || ||||||||||| |||||||| || ||||||||||||||||| || ||||
Sbjct: 496 actgcgagatctatgcttcttgcgaaccttgtccaatgtgctttggtgcaattcatcttt 555
Query: 362 ctcgaattaagaggttggtttatggagcgaaggctgaggcagcaattgctattgggtttg 421
| |||||||||||||||||||||| | | || || || ||||| || ||||| ||||
Sbjct: 556 caagaattaagaggttggtttatggggttgaagcagaagctgcaatagcaattggctttg 615
Query: 422 atgattttattgcggatgcattgcgaggtactggattctatcagaa 467
|||||||||| || || ||| || |||| ||||| || ||||||||
Sbjct: 616 atgattttatcgctgacgcactgagaggcactggtttttatcagaa 661
>gnl|LJGI|FS355001
Length = 579
Score = 196 bits (99), Expect = 1e-49
Identities = 159/179 (88%)
Strand = Plus / Minus
Query: 371 agaggttggtttatggagcgaaggctgaggcagcaattgctattgggtttgatgatttta 430
|||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 467 agaggttggtttatggtgcaaaggcagaggcagcaattgcaattgggtttgatgatttta 408
Query: 431 ttgcggatgcattgcgaggtactggattctatcagaaagctcagttggagattaaaagag 490
|||| ||||||||| |||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 407 ttgctgatgcattgagaggcactgggttctaccagaaagcatgcttggagattaaaagag 348
Query: 491 ctgatggtaatggggccctcattgcagaagaggttttccagaaaacaaaggaaaagttc 549
||||||| |||| |||| ||||||| ||||| ||||| ||||||||||| |||||||||
Sbjct: 347 ctgatggcaatgaggccatcattgctgaagaagtttttcagaaaacaaaagaaaagttc 289
>gnl|LJGI|AV414989
Length = 416
Score = 113 bits (57), Expect = 1e-24
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 120 agaagcatacaaaggggtagattgtggacatggaggcccttttggtgctgtaattgttcg 179
||||||||| | |||| |||| | || | ||||||| |||||||||||||| || ||| |
Sbjct: 16 agaagcatatacagggatagaatatgaagatggaggaccttttggtgctgttatagtttg 75
Query: 180 taatgacgaagtagttgttagttgtcacaacatggttctgaatcacactgaccctactgc 239
|||||| |||||||||| ||||||||||||||||||||||| ||| ||| || |||||
Sbjct: 76 taatgatgaagtagttgctagttgtcacaacatggttctgaggaacaatgatccaactgc 135
Query: 240 tcatgcagaggtgacagcaataagagagg 268
|||||| || || ||||| ||||||||||
Sbjct: 136 tcatgctgaagtcacagctataagagagg 164