Miyakogusa Predicted Gene

Lj4g3v2121660.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2121660.1 tr|A9SIR8|A9SIR8_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,56.47,8e-17,MRP-S33,Ribosomal protein S27/S33,
mitochondrial; seg,NULL,NODE_69823_length_611_cov_83.433716.path2.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65725 similar to UniRef100_A7P2L4 Cluster: Chromosome...   565   e-161

>gnl|LJGI|TC65725 similar to UniRef100_A7P2L4 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 626

 Score =  565 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctaacggcggcaatcactggcggagtgacggaggcacgagcgagcatattcggccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  atgctaacggcggcaatcactggcggagtgacggaggcacgagcgagcatattcggccac 135

                                                                       
Query: 61  caattgaacctcaccggcaagaaatcaccgcacaaggttcttcgcatgaagctcttcggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 caattgaacctcaccggcaagaaatcaccgcacaaggttcttcgcatgaagctcttcggt 195

                                                                       
Query: 121 gagaaagtcgctcagtggtaccctcatgacatcaagaaagatgaccctcttgtcatggcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gagaaagtcgctcagtggtaccctcatgacatcaagaaagatgaccctcttgtcatggcc 255

                                                                       
Query: 181 cgtgaacaacaagaacgcttatcgaagcttgaaatgttgaagcggcggggtaaagggcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cgtgaacaacaagaacgcttatcgaagcttgaaatgttgaagcggcggggtaaagggcct 315

                                                        
Query: 241 cccaagaagggtcacggaaggcgtgcagccaaacgcaacaaataa 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cccaagaagggtcacggaaggcgtgcagccaaacgcaacaaataa 360