Miyakogusa Predicted Gene
- Lj4g3v1969840.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1969840.2 Non Chatacterized Hit- tr|B9SWT7|B9SWT7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.38,4e-18,FAMILY NOT NAMED,NULL; seg,NULL,CUFF.49984.2
(813 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO033944 946 0.0
gnl|LJGI|TC60319 similar to UniRef100_A7QS34 Cluster: Chromosome... 96 4e-19
gnl|LJGI|GO036761 62 6e-09
gnl|LJGI|TC64678 similar to UniRef100_A7QS35 Cluster: Chromosome... 62 6e-09
>gnl|LJGI|GO033944
Length = 608
Score = 946 bits (477), Expect = 0.0
Identities = 515/521 (98%), Gaps = 5/521 (0%)
Strand = Plus / Plus
Query: 76 accgcattacaagacggcgttgaaatcgctgctgttaaacagcatgatcaggtgctgccg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 accgcattacaagacggcgttgaaatcgctgctgttaaacagcatgatcaggtgctgccg 152
Query: 136 tggctccgatcagcggcggaagacgctgcttctccggcggtgaattccaccactctggtc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tggctccgatcagcggcggaagacgctgcttctccggcggtgaattccaccactctggtc 212
Query: 196 ctcgctcaggaacgaactcgccgcaaggatttctttcaccattttcgtcgttacaatggt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctcgctcaggaacgaactcgccgcaaggatttctttcaccattttcgtcgttacaatggt 272
Query: 256 ggctggaatatcaccaataacaattacattacgtcagttctttctactgcgattcccttc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggctggaatatcaccaataacaattacattacgtcagttctttctactgcgattcccttc 332
Query: 316 ttggctgttgctgtggcctggttcgtgattttcggggttattctaagtgttatctgtgcc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttggctgttgctgtggcctggttcgtgattttcggggttattctaagtgttatctgtgcc 392
Query: 376 tgttacttctgttgccctggagagcctaatggatattctaaattgggctatgcttcatcc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgttacttctgttgccctggagagcctaatggatattctaaattgggctatgcttcatcc 452
Query: 436 ttgatcatcctcatcctttgcaccgttgcagcaatagctggatgcattgtcttgtacatt 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgatcatcctcatcctttgcaccgttgcagcaatagctggatgcattgtcttgtacatt 512
Query: 496 agtcaggggaagtttgatggaacgacttcaaacacactggattacgttgtgagtcaggcg 555
| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||
Sbjct: 513 a-tcaggggaagtttgatggaacgacttc-aacacactggattgcgttgtgagtca-gcg 569
Query: 556 gaattcaccgctgaaaacctcaggaatgtgtcgagatattt 596
||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 570 gaattcaccgctg-aaacctca-gaatgtgtcgagatattt 608
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 atgtcacgcgtcacatcaaacccttcgttt 30
||||||||||||||||||||||||||||||
Sbjct: 18 atgtcacgcgtcacatcaaacccttcgttt 47
>gnl|LJGI|TC60319 similar to UniRef100_A7QS34 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (50%)
Length = 915
Score = 95.6 bits (48), Expect = 4e-19
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 375 ctgttacttctgttgccctggagagcctaatggatattctaaattgggctatgcttcatc 434
|||||||| |||||||| | | ||||| |||| |||||| |||| ||||||| |||
Sbjct: 679 ctgttactgctgttgccgtagggagccgtatggttattctcgtttggcctatgctctatc 738
Query: 435 cttgatcatcctcatcctttgcaccgttgcagcaatagctggatgcattgtcttgtacat 494
||||||| ||||||| | | |||| |||||||||||| ||||||||| ||| | ||||
Sbjct: 739 cttgatcttcctcattttcttcacccttgcagcaatagttggatgcatagtcctttacac 798
Query: 495 tagtcaggggaagtttgatggaacgacttcaaacacactggattacgttgtgagtcaggc 554
| ||||||||||||| |||||| || |||||||||||| | ||||| || || |||||
Sbjct: 799 tgctcaggggaagtttcatggaagcacctcaaacacactgaagtacgtggtcagccaggc 858
Query: 555 ggaattcaccgctgaaaacctcag 578
|| ||||| ||||| ||||||||
Sbjct: 859 tgacttcactgctgagaacctcag 882
>gnl|LJGI|GO036761
Length = 604
Score = 61.9 bits (31), Expect = 6e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 743 tagatgcaatgagattcgctcttattgttgttgctgctgttatgctcttcgttgc 797
|||||| ||||||||| ||||| ||| || ||||||||||||||||||| |||||
Sbjct: 213 tagatggaatgagattggctctgattattcttgctgctgttatgctctttgttgc 267
>gnl|LJGI|TC64678 similar to UniRef100_A7QS35 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 1092
Score = 61.9 bits (31), Expect = 6e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 743 tagatgcaatgagattcgctcttattgttgttgctgctgttatgctcttcgttgc 797
|||||| ||||||||| ||||| ||| || ||||||||||||||||||| |||||
Sbjct: 97 tagatggaatgagattggctctgattattcttgctgctgttatgctctttgttgc 151