Miyakogusa Predicted Gene
- Lj4g3v1880510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1880510.1 tr|A9NJT6|A9NJT6_PICSI Ribosomal protein OS=Picea
sitchensis PE=3 SV=1,61.84,2e-18,rpmJ_bact: ribosomal protein
L36,Ribosomal protein L36; Q8W464_ARATH_Q8W464;,NULL;
Ribosomal_L36,Rib,CUFF.49802.1
(303 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61427 similar to UniRef100_A5AX15 Cluster: Ribosomal ... 505 e-143
gnl|LJGI|BP067593 similar to UniRef100_A5AX15 Cluster: Ribosomal... 244 3e-64
gnl|LJGI|BP067865 similar to UniRef100_O82222 Cluster: Expressed... 78 3e-14
>gnl|LJGI|TC61427 similar to UniRef100_A5AX15 Cluster: Ribosomal protein L36; n=1;
Vitis vinifera|Rep: Ribosomal protein L36 - Vitis
vinifera (Grape), partial (54%)
Length = 760
Score = 505 bits (255), Expect = e-143
Identities = 291/303 (96%)
Strand = Plus / Plus
Query: 1 atgaaggtgcggtcatctatgaagaagatgtgtgaattttgtatgacggttaaacgtcgc 60
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 139 atgaaggtgcggtcatctgtgaagaagatgtgtgaattttgtaagacggttaaacgtcgc 198
Query: 61 ggacgtgtctatgtgatatgctcagccaatcctaagcacaaacaaagacaaggcatgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ggacgtgtctatgtgatatgctcagccaatcctaagcacaaacaaagacaaggcatgtca 258
Query: 121 acttttgcaaatgaggggccatcaaatccggtgtccttggagataaactcggccaagcag 180
|| ||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 259 acatttgcaaatgaagggccatccaatccggtgtccttggagataagctcagccaagcag 318
Query: 181 gaaattaggctacctcttactttgcgactaggtccagcctctatttttccccagtggcac 240
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||
Sbjct: 319 gaaattaggctacctcttactttgcgaccaggtccagcctctatttttccacagaggcac 378
Query: 241 aacttgtccatgttgtatggatggagggtgggcctgacctctattctcttcaggaagtag 300
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 379 agcttgtccatgttgtatggatggagggtgggcctgtcctctattctcttcaggaagtag 438
Query: 301 gaa 303
|||
Sbjct: 439 gaa 441
>gnl|LJGI|BP067593 similar to UniRef100_A5AX15 Cluster: Ribosomal protein L36; n=1;
Vitis vinifera|Rep: Ribosomal protein L36 - Vitis
vinifera (Grape), partial (47%)
Length = 423
Score = 244 bits (123), Expect = 3e-64
Identities = 138/143 (96%)
Strand = Plus / Plus
Query: 1 atgaaggtgcggtcatctatgaagaagatgtgtgaattttgtatgacggttaaacgtcgc 60
|||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 50 atgaaggtgcggtcatctgtgaagaagatgtgtgaatttagtaagacggttaaacgtcgc 109
Query: 61 ggacgtgtctatgtgatatgctcagccaatcctaagcacaaacaaagacaaggcatgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggacgtgtctatgtgatatgctcagccaatcctaagcacaaacaaagacaaggcatgtca 169
Query: 121 acttttgcaaatgaggggccatc 143
|| ||||||||||| ||||||||
Sbjct: 170 acatttgcaaatgaagggccatc 192
>gnl|LJGI|BP067865 similar to UniRef100_O82222 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana, partial (9%)
Length = 407
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 158 tggagataaactcggccaagcaggaaattaggctacctcttactttgcgactaggtcca 216
||||||||| ||| ||||||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 349 tggagataagctccgccaagcaggaaattaggctacctcatactttacgaccaggtcca 407