Miyakogusa Predicted Gene

Lj4g3v1327420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1327420.1 Non Chatacterized Hit- tr|G8A1U0|G8A1U0_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,46.58,0,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
Dimer_Tnp_hAT,HAT dimerisation; DUF4413,Domain of un,CUFF.48830.1
         (978 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81662 similar to UniRef100_Q9SI73 Cluster: F23N19.13;...   946   0.0  

>gnl|LJGI|TC81662 similar to UniRef100_Q9SI73 Cluster: F23N19.13; n=1; Arabidopsis
           thaliana|Rep: F23N19.13 - Arabidopsis thaliana
           (Mouse-ear cress), partial (11%)
          Length = 777

 Score =  946 bits (477), Expect = 0.0
 Identities = 519/533 (97%)
 Strand = Plus / Plus

                                                                       
Query: 374 agtttaggaaatattggagtgtatatagttctgttcttgcaatgggagcagctcttgacc 433
           |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2   agtttaggaaattttggagtgtatatagttctgtgcttgcaatgggagcagctcttgacc 61

                                                                       
Query: 434 caagggtgaagttggagtcgttgagctattgttttcaaaaagttgatacttccacttttg 493
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 62  caagggtgaagttagagtcgttgagctattgttttcaaaaagttgatacttccacttctg 121

                                                                       
Query: 494 aaataaagttggaagtagtaaagagaaacttgtacatgctatttgagaagtacactagca 553
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaataaagttggaagtagtaaagagaaacttgtacatgctatttgagaagtacactagca 181

                                                                       
Query: 554 tacatgctacttctatgcaaaatacttctcagactcagagggtttctcaggatacagagt 613
           ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 182 tacatgctacttctatgcaaaatacttctcagacttagagagtttctcaggatacagagt 241

                                                                       
Query: 614 atgatgaactcgataagcacaagaagaaggttgccatgacacaggggaagtcacaacttg 673
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 242 atgatgaactcgataagcacaagaagaaggttgccacgacacaggggaagtcacaacttg 301

                                                                       
Query: 674 atctttattttgatgagccatctttgagttttggggataataaagatttggatgtgttgc 733
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atctttattttgatgagccatctttgagttttggggataataaagatttggatgtgttgc 361

                                                                       
Query: 734 agtggtggaaagaaaataatagtcgattttttgagctatcaattatggcacgtgacttgc 793
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 362 agtggtggaaagaaaataatagtcgattttttgagctatcaattatggcacgtgacttgt 421

                                                                       
Query: 794 tttgcattcctcttactactgttgcatctgaatctgcattcagcattggttcatatgtcc 853
           ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 422 tttgcattcctattactaccgttgcatctgaatctgccttcagcattggttcacatgtcc 481

                                                                
Query: 854 ttaacaagtatagaagtcgacttttatccaaaaatgtggaagctttgatgtgt 906
           |||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 482 ttaacaagtatagaagtcgacttttatcaaaaaatgtggaagcttagatgtgt 534