Miyakogusa Predicted Gene

Lj4g3v1214970.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1214970.1 NODE_104856_length_297_cov_8.104377.path1.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV770689 similar to UniRef100_A6CRE5 Cluster: Shikimate...   601   e-171

>gnl|LJGI|AV770689 similar to UniRef100_A6CRE5 Cluster: Shikimate kinase; n=1;
           Bacillus sp. SG-1|Rep: Shikimate kinase - Bacillus sp.
           SG-1, partial (9%)
          Length = 461

 Score =  601 bits (303), Expect = e-171
 Identities = 312/315 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagactgaacttgtgcattcaggtgtggttgtgactgatagaaacgcagcacagagt 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  atggagactgaacttgtggattcaggtgtggttgtgactgatagaaacgcagcacagagt 142

                                                                       
Query: 61  catggacaaggtggaaaaggtcataggcatggtgggcatggtggtggacaggggggacaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 143 catggacaaggtggaaaaggtcataggcatggtgggcatggtggtggacaggagggacaa 202

                                                                       
Query: 121 aggtgtaggcatggcacaaagagtcctggatctcagcaaagggaagctgacgggaaaaga 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 203 aggtgtaggcatggcacaaagagtcctgcatctcagcaaagggaagctgacgggaaaaga 262

                                                                       
Query: 181 aacaaggaaactggtaatcctggaccaagttcaattgtgaaaaaaggtccatcatcatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aacaaggaaactggtaatcctggaccaagttcaattgtgaaaaaaggtccatcatcatct 322

                                                                       
Query: 241 gaaggacaagctataaacgtgaggagaggttcacctttacctctacaaggaaggtcatgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaaggacaagctataaacgtgaggagaggttcacctttacctctacaaggaaggtcatgt 382

                          
Query: 301 caaagaaccattctg 315
           |||||||||||||||
Sbjct: 383 caaagaaccattctg 397