Miyakogusa Predicted Gene
- Lj4g3v1037720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1037720.1 tr|B7FF19|B7FF19_LOTJA ARO1-like protein 1
OS=Lotus japonicus PE=4 SV=1,100,0,ARM-type_fold,Armadillo-type fold;
PTHR31858,NULL; ARM-like,Armadillo-like helical; ARM,Armadillo;
A,CUFF.48314.1
(1969 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82061 similar to UniRef100_A7QDX4 Cluster: Chromosome... 999 0.0
gnl|LJGI|TC74582 weakly similar to UniRef100_A7P891 Cluster: Chr... 749 0.0
gnl|LJGI|DC594604 similar to UniRef100_A7QDX4 Cluster: Chromosom... 507 e-143
gnl|LJGI|TC60584 similar to UniRef100_A7QDX4 Cluster: Chromosome... 383 e-105
gnl|LJGI|FS335525 similar to UniRef100_A7QDX4 Cluster: Chromosom... 68 2e-10
gnl|LJGI|FS344326 similar to UniRef100_A7QDX4 Cluster: Chromosom... 68 2e-10
>gnl|LJGI|TC82061 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 719
Score = 999 bits (504), Expect = 0.0
Identities = 507/508 (99%)
Strand = Plus / Plus
Query: 1005 tcggatacagcatcccttggctgataagtcccaaaatcagatgcttaaagtggtcacaag 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tcggatacagcatcccttggctgataagtcccaaaatcagatgcttaaagtggtcacaag 271
Query: 1065 tacaatggcaatgcatgctagttccaacaagaactccaaccaaggcaatgagacgactca 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tacaatggcaatgcatgctagttccaacaagaactccaaccaaggcaatgagacgactca 331
Query: 1125 aacgagtcaaaactcgtcacaaacaccggctaagcagagctattcctattctgggattaa 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aacgagtcaaaactcgtcacaaacaccggctaagcagagctattcctattctgggattaa 391
Query: 1185 catgaagggaagggagcttgaagaccctgaggttaaggctaagatgaaagcaatggcagc 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 catgaagggaagggagcttgaagaccctgaggttaaggctaagatgaaagcaatggcagc 451
Query: 1245 aagggccttgtggtgtttagccaagggtaactcttccatttgtcgcagcataacggaatc 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aagggccttgtggtgtttagccaagggtaactcttccatttgtcgcagcataacggaatc 511
Query: 1305 gagggctttgttgtgctttgccattctccttgagaaagggtctagagatgtcaagtacaa 1364
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gagggctttgttgtgccttgccattctccttgagaaagggtctagagatgtcaagtacaa 571
Query: 1365 ttcagccatggcagtgatggagatcactgaagtggctgagaaagatcctgagttgagaag 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttcagccatggcagtgatggagatcactgaagtggctgagaaagatcctgagttgagaag 631
Query: 1425 atcagcattcaagcccaactctcctgcttgcaaagcagttgttgatcaagtgctcaagat 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atcagcattcaagcccaactctcctgcttgcaaagcagttgttgatcaagtgctcaagat 691
Query: 1485 catcgacgaagaagacacggacctccta 1512
||||||||||||||||||||||||||||
Sbjct: 692 catcgacgaagaagacacggacctccta 719
Score = 301 bits (152), Expect = 9e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 796 caagatctctttgctcagcatcacattgttcgattgcttgtgagccatctcgcgtttgaa 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 caagatctctttgctcagcatcacattgttcgattgcttgtgagccatctcgcgtttgaa 62
Query: 856 acggttcaggagcatagtaagtactccattgttacgaaatcgatccacgcggttgtgatc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 acggttcaggagcatagtaagtactccattgttacgaaatcgatccacgcggttgtgatc 122
Query: 916 gcgagtagcaataacaacaacggttctaacaa 947
||||||||||||||||||||||||||||||||
Sbjct: 123 gcgagtagcaataacaacaacggttctaacaa 154
>gnl|LJGI|TC74582 weakly similar to UniRef100_A7P891 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 544
Score = 749 bits (378), Expect = 0.0
Identities = 393/398 (98%)
Strand = Plus / Plus
Query: 1572 gatcatcggtcccttggttcggcttctggatgaaagagaggcagaggtgacaagagaggc 1631
|||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1 gatcatcggtcccttgcttcggcttctggatgaaagagagccagagttgacaagagaggc 60
Query: 1632 tacaatctccctcatgaaattcgcctgcaccgagaactacctccacattgatcactccaa 1691
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 tacaatctccctcatgaaattcgcctgcaccgagaactacctccaccttgatcactccaa 120
Query: 1692 ggcgattataactgcaggtggtgcaaaacacctggtccagctggtgtatcttggagagca 1751
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcgattataactgcaggtggtgctaaacacctggtccagctggtgtatcttggagagca 180
Query: 1752 cacagttcaagttccagcattgtttcttctctcgtacattgctctgcatgttgctgacag 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacagttcaagttccagcattgtttcttctctcgtacattgctctgcatgttgctgacag 240
Query: 1812 tgaggagcttgctcgggctgaggtgctcgcagtgcttgaatgggcatccaagagacctaa 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaggagcttgctcgggctgaggtgctcgcagtgcttgaatgggcatccaagagacctaa 300
Query: 1872 catgacccaagatgaaacgcttgaggcattgttgcatgagtccaagagtaggttggagct 1931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catgacccaagatgaaacgcttgaggcattgttgcatgagtccaagagtaggttggagct 360
Query: 1932 ttaccagtctagaggttcgagaatgttccaaaaatgat 1969
||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaccagtctagaggttcgagaatgttccaaaaatgat 398
>gnl|LJGI|DC594604 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 585
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 1 atggccgcggaaatagtaaaacaactgctcgcgaaaccgatccaattagcggaccaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atggccgcggaaatagtaaaacaactgctcgcgaaaccgatccaattagcggaccaggtc 389
Query: 61 agcaaagcggcggaggaaggaagcgcgtcgttcaaggtggagtgtttagaattgaaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agcaaagcggcggaggaaggaagcgcgtcgttcaaggtggagtgtttagaattgaaatcc 449
Query: 121 aagacggagaagctcgccggacttctccgtcaggcggcgcgtgcgagctccgacctctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aagacggagaagctcgccggacttctccgtcaggcggcgcgtgcgagctccgacctctac 509
Query: 181 gaacgccccacacggcggatcatcggagatactgaacaggttctggaaagagcgctgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaacgccccacacggcggatcatcggagatactgaacaggttctggaaagagcgctgact 569
Query: 241 ttagtcctcaagtgca 256
||||||||||||||||
Sbjct: 570 ttagtcctcaagtgca 585
>gnl|LJGI|TC60584 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1123
Score = 383 bits (193), Expect = e-105
Identities = 635/777 (81%), Gaps = 4/777 (0%)
Strand = Plus / Plus
Query: 1172 attctgggattaacatgaagggaagggagcttgaagaccctgaggttaaggctaagatga 1231
|||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||
Sbjct: 92 attcggggattaacatgaagggaagggataatgaagaccctgagacaaaggctagcatga 151
Query: 1232 aagcaatggcagcaagggccttgtggtgtttagccaagggtaactcttcc-atttgtcgc 1290
| | ||||||||||||||| | ||| || || |||||||| | | || ||||||||
Sbjct: 152 aggaaatggcagcaagggcactctggcacttggctaagggtaa-tgtcccgatttgtcgt 210
Query: 1291 agcataacggaatcgagggctttgttgtgctttgccattctccttgagaaagg-gtctag 1349
||||| ||||||||||| ||||||||||||||||| |||||||||||||||| | ||
Sbjct: 211 agcatcacggaatcgagagctttgttgtgctttgctgttctccttgagaaaggagaggag 270
Query: 1350 agatgtcaagtacaattcagccatggcagtgatggagatcactgaagtggctgagaaaga 1409
| | || |||||||||| |||||||| |||||||||||||||| ||||||||||||||
Sbjct: 271 a-aggtgcagtacaattcggccatggcggtgatggagatcactgctgtggctgagaaaga 329
Query: 1410 tcctgagttgagaagatcagcattcaagcccaactctcctgcttgcaaagcagttgttga 1469
| |||| ||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 330 tgctgatttgagaaagtctgcattcaagccaaactcccctgcctgcaaagcggttgttga 389
Query: 1470 tcaagtgctcaagatcatcgacgaagaagacacggacctcctaatcccctgcctaaaagc 1529
|||| |||| ||||| || || | | ||| | || ||||| || || || | | ||
Sbjct: 390 tcaattgcttaagataattgagaaggcagattcagatctcctcattccttgtgtcagtgc 449
Query: 1530 tattgggagtttagcaaggacattcagagctacagagacgaggatcatcggtcccttggt 1589
|||||||| ||| |||||||| || | || || ||||||||||| ||||||||||||||
Sbjct: 450 tattgggaatttggcaaggacttttcgtgccacggagacgaggatgatcggtcccttggt 509
Query: 1590 tcggcttctggatgaaagagaggcagaggtgacaagagaggctacaatctccctcatgaa 1649
|||||||| |||||||||||||||||||| || ||||| | ||| |||||| |||
Sbjct: 510 gcggcttcttgatgaaagagaggcagaggtatacagggaggcgtccatcgccctcacgaa 569
Query: 1650 attcgcctgcaccgagaactacctccacattgatcactccaaggcgattataactgcagg 1709
|||||||||||| || |||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 570 attcgcctgcactgataactaccttcaccttgatcactccaaggcgattataaccgcagg 629
Query: 1710 tggtgcaaaacacctggtccagctggtgtatcttggagagcacacagttcaagttccagc 1769
|| || |||||| || | ||||| |||||| | ||||| || | ||||| |||| ||
Sbjct: 630 cggggctaaacacttgattcagcttgtgtatttcggagaacagatggttcagattcctgc 689
Query: 1770 attgtttcttctctcgtacattgctctgcatgttgctgacagtgaggagcttgctcgggc 1829
||| |||| ||||| |||||||| ||||| || | ||||| || |||||||||| ||
Sbjct: 690 attagttctgctctcctacattgcgctgcacgtcccggacagcgaagagcttgctcagga 749
Query: 1830 tgaggtgctcgcagtgcttgaatgggcatccaagagacctaacatgacccaagatgaaac 1889
||||||| | | |||||||||||||||||| ||| | || |||||| || ||||||||
Sbjct: 750 tgaggtgttgggagtgcttgaatgggcatcaaagcaatcttccatgacacatgatgaaac 809
Query: 1890 gcttgaggcattgttgcatgagtccaagagtaggttggagctttaccagtctagagg 1946
|||||||| ||| |||| || ||||||||||| ||||||||||||||||| |||||
Sbjct: 810 ccttgaggctttgctgcaagaatccaagagtagattggagctttaccagtccagagg 866
>gnl|LJGI|FS335525 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 507
Score = 67.9 bits (34), Expect = 2e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 118 tccaagacggagaagctcgccggacttctccgtcaggcggcgcgtgcgagctccgacctc 177
|||||||| || || ||||||| || ||||| |||||||| | || ||||||||||||
Sbjct: 335 tccaagacagaaaaactcgccgcgctgctccggcaggcggccagagccagctccgacctc 394
Query: 178 tacgaacgccccacacggcggatcat 203
||||||||||| || |||||||||||
Sbjct: 395 tacgaacgccctacccggcggatcat 420
>gnl|LJGI|FS344326 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 501
Score = 67.9 bits (34), Expect = 2e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 118 tccaagacggagaagctcgccggacttctccgtcaggcggcgcgtgcgagctccgacctc 177
|||||||| || || ||||||| || ||||| |||||||| | || ||||||||||||
Sbjct: 377 tccaagacagaaaaactcgccgcgctgctccggcaggcggccagagccagctccgacctc 436
Query: 178 tacgaacgccccacacggcggatcat 203
||||||||||| || |||||||||||
Sbjct: 437 tacgaacgccctacccggcggatcat 462