Miyakogusa Predicted Gene
- Lj4g3v0934570.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0934570.2 tr|B9GPD0|B9GPD0_POPTR GRAS family transcription
factor OS=Populus trichocarpa GN=GRAS59 PE=4
SV=1,47.15,4e-18,GRAS,Transcription factor GRAS; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.48207.2
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78752 similar to UniRef100_Q9FYW2 Cluster: BAC19.14; ... 1039 0.0
gnl|LJGI|TC81205 similar to UniRef100_A7PUZ1 Cluster: Chromosome... 821 0.0
gnl|LJGI|BW598261 72 7e-12
>gnl|LJGI|TC78752 similar to UniRef100_Q9FYW2 Cluster: BAC19.14; n=1; Solanum
lycopersicum|Rep: BAC19.14 - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (8%)
Length = 562
Score = 1039 bits (524), Expect = 0.0
Identities = 524/524 (100%)
Strand = Plus / Plus
Query: 1 atgagagttcccgtatcctcatcatcatcatctacacaagccaacacatcaaaactcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgagagttcccgtatcctcatcatcatcatctacacaagccaacacatcaaaactcgcc 98
Query: 61 caaaacgtgatcctccacaccacccctcctaatcccaacaccatcaacaacaacaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 caaaacgtgatcctccacaccacccctcctaatcccaacaccatcaacaacaacaatcaa 158
Query: 121 aacctgtgctacgagcccaaatcagtgcttgatctttgtcgtagtccaagtcctgagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aacctgtgctacgagcccaaatcagtgcttgatctttgtcgtagtccaagtcctgagaag 218
Query: 181 aaaaccactgctccaaagccagaaccagacgaacaacaacatagtatagaagaacaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaaaccactgctccaaagccagaaccagacgaacaacaacatagtatagaagaacaattg 278
Query: 241 gaagatcatgtgttgcctaatttggactggtgggattccataatgaaggatttgggttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaagatcatgtgttgcctaatttggactggtgggattccataatgaaggatttgggttta 338
Query: 301 cacgacgattctacaacaccccttttgaagactaattctgatagttcttctcttaattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cacgacgattctacaacaccccttttgaagactaattctgatagttcttctcttaattcc 398
Query: 361 aatccatgcctccctgaaatttacccaaaccaaccctttgatcaacctcaagacttcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aatccatgcctccctgaaatttacccaaaccaaccctttgatcaacctcaagacttcacc 458
Query: 421 agcctctctgaaatttactccaatcaaagcctggcctataatttcaccaacaccaccacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agcctctctgaaatttactccaatcaaagcctggcctataatttcaccaacaccaccacc 518
Query: 481 cctagccccagtttagacccttcaattcatgacttcaacccaca 524
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cctagccccagtttagacccttcaattcatgacttcaacccaca 562
>gnl|LJGI|TC81205 similar to UniRef100_A7PUZ1 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 414
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 492 tttagacccttcaattcatgacttcaacccacaaacacacaacaacaattgggatttcat 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttagacccttcaattcatgacttcaacccacaaacacacaacaacaattgggatttcat 60
Query: 552 cgaagagctaatccgcgccgcggattgcttcgatagcaaccagctccagctcgctcaagc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaagagctaatccgcgccgcggattgcttcgatagcaaccagctccagctcgctcaagc 120
Query: 612 gatactggagcggctcaaccaacggcttagatcgccgtcaggtaagccgctccatagagc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatactggagcggctcaaccaacggcttagatcgccgtcaggtaagccgctccatagagc 180
Query: 672 cgctttccacttcaaagatgctctgcaatcgcttttgtccggctcgaaccggacaaatgc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgctttccacttcaaagatgctctgcaatcgcttttgtccggctcgaaccggacaaatgc 240
Query: 732 accgccaaggctttcatccatggcggagattgtgcagagcatcaggatcttcaaggcctt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgccaaggctttcatccatggcggagattgtgcagagcatcaggatcttcaaggcctt 300
Query: 792 ttcaggaatttcaccgatcccgatgttttccatctttaccaccaatcaagctctgcttga 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaggaatttcaccgatcccgatgttttccatctttaccaccaatcaagctctgcttga 360
Query: 852 agcgcttcatggttctttgttcatgcacgttgtggatttcgagatcggcctcgg 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcgcttcatggttctttgttcatgcacgttgtggatttcgagatcggcctcgg 414
>gnl|LJGI|BW598261
Length = 485
Score = 71.9 bits (36), Expect = 7e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 253 ttgcctaatttggactggtgggattccataatgaaggatt 292
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgcctaatttggactggtaggattccataatgaaggatt 446