Miyakogusa Predicted Gene
- Lj4g3v0408380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0408380.1 Non Chatacterized Hit- tr|D7KNJ5|D7KNJ5_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,28.97,3e-18,seg,NULL,CUFF.47053.1
(1047 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59708 similar to UniRef100_A7PMD0 Cluster: Chromosome... 412 e-114
gnl|LJGI|GO013038 similar to UniRef100_Q2QGD1 Cluster: ATP synth... 58 1e-07
>gnl|LJGI|TC59708 similar to UniRef100_A7PMD0 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1303
Score = 412 bits (208), Expect = e-114
Identities = 582/708 (82%), Gaps = 24/708 (3%)
Strand = Plus / Plus
Query: 294 agataaaattttcagtaaggattatctgcctgttctgattcaacttggattcatttacct 353
|||||||| ||| || ||||| ||| |||||||| | |||||||||| | |||||||| |
Sbjct: 416 agataaaagttttagcaaggactatttgcctgttttaattcaacttgtactcatttactt 475
Query: 354 tgtccctcttcaagttctagaactatgttctgcaattttaactatggatttagcctcaaa 413
||| ||||| || ||||||||||| ||||||||| || |||| | |||||||| |||||
Sbjct: 476 tgtgcctctgcatgttctagaactctgttctgcagttataacaacagatttagcttcaaa 535
Query: 414 gctgcgctcagg------agacaataacctgagtctcactctcaagcagatgtttcaaaa 467
|||| | |||| ||| |||||| ||||||||| ||||||||||||||||
Sbjct: 536 gctgaggtcagattcagaagagaataacatgagtctca------agcagatgtttcaaaa 589
Query: 468 ctccattattgatatatcaatcatgaaaggaacatttatcacttctttatacatgctctt 527
|||| | || ||||| ||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 590 atccact---gacatatccatcatgaaaggcacattcatcacttctttgtatatgctctt 646
Query: 528 tttgtcagcgtatctcttaattacatttccatggacattgaataacttttattgtttgtc 587
||||||||| | ||| ||||| | || ||||||| ||| | ||||| ||| |||||||
Sbjct: 647 tttgtcagcttctcttttaatggccttcccatggatatttagtaactgttacggtttgtc 706
Query: 588 tgaggcttttggggactacatattttctgccataatttcattagtttgctgtctagttct 647
||||| |||||||| |||||| |||| ||| || |||| ||||| | | | |
Sbjct: 707 tgaggtttttgggggctacattttttttgcaattattt---------gctgtgtggctat 757
Query: 648 tgcaaagttgttgatggtgtatttggaatggagttctattttgaatatgagtattgtaat 707
|| ||| ||| | ||| ||||||| ||||||||| |||||| ||| ||||||||||| ||
Sbjct: 758 tggaaaattgctaatgatgtatttagaatggagtgctatttggaacatgagtattgtgat 817
Query: 708 atcagtcctggatggtatatatggttttggggcattaagagtttcatatgccttcagcag 767
|||||| |||||||| |||||||| ||| ||||| |||||||||||| |||||||||
Sbjct: 818 atcagtgttggatggtgtatatggtcctggagcattcagagtttcatatttcttcagcag 877
Query: 768 aggtaatcagaagagaggactctttttgatgcttgttttctttgttttgggactttgttt 827
|||||||||||||||||| || |||||||||||||||||||| |||| ||| |||||||
Sbjct: 878 aggtaatcagaagagagggcttcttttgatgcttgttttctttatttttggattttgttt 937
Query: 828 aaggttatcatgtctatcccttgaaagctatgaaagagggattggaatttttgtgcaaat 887
||||||| | |||| || | ||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 938 aaggttaataagtctgtcaatggaatgctataaaggaggggttggaatttttctgcaaat 997
Query: 888 tggggtcctcactgtggtaaatacactaaaatgggtgtcatgcatgatttacttctatga 947
|||||||||||||||||| |||||||| |||||||||||||| ||||||| |||| |||
Sbjct: 998 tggggtcctcactgtggtgaatacactgaaatgggtgtcatgtgtgatttatttctgtga 1057
Query: 948 ttgcaagaagaggacaatggagaagaaagttgatgaggaattgggtaa 995
|||||||||||| | ||||||||||| |||||||||||||||||||||
Sbjct: 1058 ttgcaagaagagaaaaatggagaagagagttgatgaggaattgggtaa 1105
Score = 127 bits (64), Expect = 2e-28
Identities = 103/116 (88%)
Strand = Plus / Plus
Query: 38 tggaggtcttggatatcctcaaggaagctgtaaaagtctatgtcaaaaacatcaacttca 97
||||||| || ||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 109 tggaggtattagatatcctcaaggaaactctaaccatctatgtcaaaaacatcaacttca 168
Query: 98 tcaccttcacaattgtcacttctcttcctttcttttgtgttatgatttactttgaa 153
| | |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 169 taatcttcaccattctcacttctcttcctttcttttgtgtcatggtttactttgaa 224
>gnl|LJGI|GO013038 similar to UniRef100_Q2QGD1 Cluster: ATP synthase F0 subunit 6;
n=1; Manouria emys|Rep: ATP synthase F0 subunit 6 -
Manouria emys, partial (9%)
Length = 738
Score = 58.0 bits (29), Expect = 1e-07
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 53 tcctcaaggaagctgtaaaagtctatgtcaaaaacatcaacttcatcaccttcacaattg 112
|||||| ||||||||| | ||||| ||| |||| ||||||||||| ||||||| ||
Sbjct: 162 tcctcagggaagctgttatgatctatttcagaaacctcaacttcatcgtcttcacatttc 221
Query: 113 tcacttctcttcctttcttttgtgttatgatttactttgaa 153
|||||||||||||| || ||| | | ||| |||||||||||
Sbjct: 222 tcacttctcttcctctcctttttatcatgctttactttgaa 262