Miyakogusa Predicted Gene
- Lj3g3v3553980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3553980.1 CUFF.46004.1
(585 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71057 similar to UniRef100_A7P8N5 Cluster: Chromosome... 1160 0.0
gnl|LJGI|BP070747 similar to UniRef100_O22265 Cluster: Signal re... 446 e-125
>gnl|LJGI|TC71057 similar to UniRef100_A7P8N5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (78%)
Length = 1487
Score = 1160 bits (585), Expect = 0.0
Identities = 585/585 (100%)
Strand = Plus / Plus
Query: 1 atggcggcgctgcacatggcggcggggtatgtaaggcctggcgtggcgaagctgctgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atggcggcgctgcacatggcggcggggtatgtaaggcctggcgtggcgaagctgctgctg 757
Query: 61 gagctgggcgcggatccggaggtggaggataaacgcgggaggacggcgttggatctggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gagctgggcgcggatccggaggtggaggataaacgcgggaggacggcgttggatctggcg 817
Query: 121 agggagctgctgaatgcgacgccgaaggggaacccgatgcaatttgggcggagagtgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 agggagctgctgaatgcgacgccgaaggggaacccgatgcaatttgggcggagagtgggg 877
Query: 181 ctggaaggggtggttagggttttggaaggggcggtgttcgagtacgcggaggtggaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ctggaaggggtggttagggttttggaaggggcggtgttcgagtacgcggaggtggaggag 937
Query: 241 atattggagcggagggggaagggtgagaatttggagtatctcgtgcggtggaaggacggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 atattggagcggagggggaagggtgagaatttggagtatctcgtgcggtggaaggacggt 997
Query: 301 ggtggaaacgagtgggtgaatgcgaggtttgtggcggaggatctggtgagggattacgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ggtggaaacgagtgggtgaatgcgaggtttgtggcggaggatctggtgagggattacgag 1057
Query: 361 gcggggctggagtacgcggtggcggaggcggtggttggccggagagttggggatgagggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 gcggggctggagtacgcggtggcggaggcggtggttggccggagagttggggatgagggg 1117
Query: 421 aagttggagctgttggttaagtgggttgatttggaacagcccacttgggagcccgaggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 aagttggagctgttggttaagtgggttgatttggaacagcccacttgggagcccgaggag 1177
Query: 481 aatgtggatcctgagcttgttaagctctatgagcaaagtaacaatcaagcccagcccagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 aatgtggatcctgagcttgttaagctctatgagcaaagtaacaatcaagcccagcccagt 1237
Query: 541 agtaatgggcctgcttcgaatcaggatggcccagaaactttgtaa 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 agtaatgggcctgcttcgaatcaggatggcccagaaactttgtaa 1282
>gnl|LJGI|BP070747 similar to UniRef100_O22265 Cluster: Signal recognition particle 43
kDa protein, chloroplast precursor; n=1; Arabidopsis
thaliana|Rep: Signal recognition particle 43 kDa
protein, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (7%)
Length = 425
Score = 446 bits (225), Expect = e-125
Identities = 340/369 (92%), Gaps = 7/369 (1%)
Strand = Plus / Minus
Query: 213 ggtgttcgagtacgcggaggtggaggagatattggagcggagggggaagggtgagaa-tt 271
|||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||
Sbjct: 425 ggtgttcgagtacgcggaggtggaggagatatggatacggagggggaagggtgagaaatt 366
Query: 272 tggagtatctcgtgcggtggaaggac-ggtggtggaaa-cgagtgggtgaatgcgaggtt 329
|||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||
Sbjct: 365 tggagtatctcgtgcgttggaaggaccggtggtggaaatcgagtgggtgaatgcagtatt 306
Query: 330 tgtggcggaggatctggtgaggg-attacgaggcggggctggagtacgcggtggcggagg 388
|||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct: 305 tgtgtaggaggatctggtgaggggatcacgagacggggctggagtacgcggtgacggagg 246
Query: 389 cggtggttggccggagagttggggatgaggggaagttggagctgttggt-taagtgggtt 447
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 245 cggtggttggccggagagttggggatgaggggaagttggagctgttggtctaagtgggtt 186
Query: 448 gatttggaacagcccact-tgggagcccgaggagaatgtggatcctgagcttgttaagct 506
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 185 gatgtggaacagcccactctgggagcccgaggagaatgtcgatcctgagcttgttaagct 126
Query: 507 ctatgagcaaagtaacaatcaagcccagcccagtagtaatgggcctgcttcgaatcag-g 565
|||||||| |||| || |||||||||||||||||| ||||||| ||||||||||||| |
Sbjct: 125 ctatgagccaagttactatcaagcccagcccagtaccaatgggcgtgcttcgaatcagcg 66
Query: 566 atggcccag 574
|||||||||
Sbjct: 65 atggcccag 57