Miyakogusa Predicted Gene
- Lj3g3v3359730.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3359730.2 tr|I1JZE3|I1JZE3_SOYBN Methylenetetrahydrofolate
reductase OS=Glycine max GN=Gma.2387 PE=3 SV=1,90.32,0,no
description,NULL; MTHFR,Methylenetetrahydrofolate reductase; seg,NULL;
fadh2_euk: methylenetetrah,CUFF.45670.2
(1251 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57460 similar to UniRef100_A5ATB7 Cluster: Methylenet... 1215 0.0
gnl|LJGI|GO032504 similar to UniRef100_A5ATB7 Cluster: Methylene... 454 e-127
gnl|LJGI|TC74190 similar to UniRef100_A5ATB7 Cluster: Methylenet... 446 e-124
gnl|LJGI|AV766388 weakly similar to UniRef100_O80585 Cluster: Me... 54 2e-06
>gnl|LJGI|TC57460 similar to UniRef100_A5ATB7 Cluster: Methylenetetrahydrofolate
reductase; n=1; Vitis vinifera|Rep:
Methylenetetrahydrofolate reductase - Vitis vinifera
(Grape), partial (51%)
Length = 1343
Score = 1215 bits (613), Expect = 0.0
Identities = 844/921 (91%)
Strand = Plus / Plus
Query: 1 atgaaggtgatagagaaagtaagagcagctgcagcggctgatccagatagagttgtgttc 60
|||||||| ||||||||| || | |||||||||| ||||||| ||| ||| || |||
Sbjct: 101 atgaaggttatagagaaaatacacgaagctgcagcgtctgatccgaataaagtggtcttc 160
Query: 61 tcatttgagttcttcccacctaagactgaagatggggtagataatctgtttgagaggatg 120
||||||||||||||||| || |||||||||||||| |||| |||||| |||||||||||
Sbjct: 161 tcatttgagttcttcccccccaagactgaagatggagtagttaatctacttgagaggatg 220
Query: 121 gaccgcatggtggcccacaatccttcattttgtgatatcacttggggtgctggaggatca 180
||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 221 gaccgtatggtggctcacagtccttcattttgtgatattacttggggtgctggaggatca 280
Query: 181 accgctgatgtaactttggaaattgccaacaagatgcagaacattgtgtgtgtggaaacc 240
||||| |||||||| || || |||||||| ||||||||||| | || |||||||||||
Sbjct: 281 accgcggatgtaacattagatattgccaaaaagatgcagaataccgtaggtgtggaaacc 340
Query: 241 atgatccacctcacctgcaccaacatgcctgttgagaagattgacaatgcactccagaca 300
||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 341 atgatgcacctcacctgcaccaacatgcctgttgagaagattgacgatgctctcgagacc 400
Query: 301 atcaagtccaatggcctccagaacgtgcttgctcttcgaggcgatcccccacatggtcag 360
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 401 atcaagtccaatggcctccagaatgtgcttgctcttcgaggtgatcccccacatggtcag 460
Query: 361 gacaaatttgtccagacagaaggtggctttgcctgcgcacgggatctggtgaaacatatc 420
|||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 461 gacaaattcgtccaggtcgaaggtggctttgcctgtgcacgggacctggtgaaacatatc 520
Query: 421 agagccaaatatggtgactactttggcattacagttgctggttatccagaggcacatccg 480
||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 521 agagccaaacatggtgactactttggcattacaatcgctggttatccagaggcacatccg 580
Query: 481 gatgctatagggagtgatggggtggctacaacagaagcttatcaaaatgaacttacttac 540
||||||||||| ||| ||||| |||||||| |||||| |||||||||||| |||||||||
Sbjct: 581 gatgctataggaagtaatgggttggctacaccagaagattatcaaaatgatcttacttac 640
Query: 541 ctgaagagcaaggttgatgccggagcagatctgattgtcactcagttattttatgatacg 600
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 641 ctgaagagcaaggttgatgccggagcagatcttattatcactcagttattttatgataca 700
Query: 601 gatatattcctcaaatttgtgaatgactgcctccaaattggaataacttgtcctatagtg 660
||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||
Sbjct: 701 gatatattcctcaaatttgcgaatgactgtcgccaaattggaataacttgtcctattgtg 760
Query: 661 ccaggcattatgcccattaataattacaagggctttatccgcatgactggtttttgtaag 720
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 761 ccaggcattatgcccattaataattacaagggatttatccgcatgactggtttttgtaaa 820
Query: 721 acaaagatacctgctgagattatggctgctttagagcctatcaaggataatgaagaagct 780
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 821 acaaagatacctgctgagattatggctgctttagagcctatcaaggacaatgaagaagct 880
Query: 781 gttaagctttatggaattcacctgggaactgaaatgtgcagaaaaattttagctcatgga 840
|||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||
Sbjct: 881 gttaaggcatatggaattcacttgggaactgaaatgtgcaaaaagattttagctcatgga 940
Query: 841 attaagacattgcatctttatacgctaaatatggagaaatcagcattggcgatactaacg 900
| |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| |
Sbjct: 941 ttcaagacattgcatctttatacactaaatttggagaaatcagcattggcaatactaaag 1000
Query: 901 agccttggcttaattgaagag 921
| |||||||||||||||||||
Sbjct: 1001 aaccttggcttaattgaagag 1021
>gnl|LJGI|GO032504 similar to UniRef100_A5ATB7 Cluster: Methylenetetrahydrofolate
reductase; n=1; Vitis vinifera|Rep:
Methylenetetrahydrofolate reductase - Vitis vinifera
(Grape), partial (23%)
Length = 663
Score = 454 bits (229), Expect = e-127
Identities = 373/421 (88%)
Strand = Plus / Plus
Query: 1 atgaaggtgatagagaaagtaagagcagctgcagcggctgatccagatagagttgtgttc 60
|||||||| ||||||||| || | |||||||||| ||||||| ||| ||| || |||
Sbjct: 243 atgaaggttatagagaaaatacacgaagctgcagcgtctgatccgaataaagtggtcttc 302
Query: 61 tcatttgagttcttcccacctaagactgaagatggggtagataatctgtttgagaggatg 120
||||||||||||||||| || |||||||||||||| |||| |||||| |||||||||||
Sbjct: 303 tcatttgagttcttcccccccaagactgaagatggagtagttaatctacttgagaggatg 362
Query: 121 gaccgcatggtggcccacaatccttcattttgtgatatcacttggggtgctggaggatca 180
|| || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 363 gaacgtatggtggcccacagtccttcattttgtgatattacttggggtgctggaggatca 422
Query: 181 accgctgatgtaactttggaaattgccaacaagatgcagaacattgtgtgtgtggaaacc 240
||||| |||||||| || || |||||||| ||||||||||| | || |||||||||||
Sbjct: 423 accgcggatgtaacattagatattgccaaaaagatgcagaataccgtaggtgtggaaacc 482
Query: 241 atgatccacctcacctgcaccaacatgcctgttgagaagattgacaatgcactccagaca 300
||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 483 atgatgcacctcacctgcaccaacatgcctgttgagaagattgacgatgctctcgagacc 542
Query: 301 atcaagtccaatggcctccagaacgtgcttgctcttcgaggcgatcccccacatggtcag 360
|||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |
Sbjct: 543 atcaagcccaatggcctccagaatgtgcttgctcttcgaggtgatcccccacatggtcgg 602
Query: 361 gacaaatttgtccagacagaaggtggctttgcctgcgcacgggatctggtgaaacatatc 420
|||||||| |||||| ||| ||||||||||||| |||||||| |||||||||||||||
Sbjct: 603 gacaaattcgtccaggtcgaaagtggctttgcctgtgcacgggacctggtgaaacatatc 662
Query: 421 a 421
|
Sbjct: 663 a 663
>gnl|LJGI|TC74190 similar to UniRef100_A5ATB7 Cluster: Methylenetetrahydrofolate
reductase; n=1; Vitis vinifera|Rep:
Methylenetetrahydrofolate reductase - Vitis vinifera
(Grape), partial (22%)
Length = 550
Score = 446 bits (225), Expect = e-124
Identities = 357/401 (89%)
Strand = Plus / Plus
Query: 1 atgaaggtgatagagaaagtaagagcagctgcagcggctgatccagatagagttgtgttc 60
|||||||| ||||||||| || | |||||||||| ||||||| ||| ||| || |||
Sbjct: 150 atgaaggttatagagaaaatacacgaagctgcagcgtctgatccgaataaagtggtcttc 209
Query: 61 tcatttgagttcttcccacctaagactgaagatggggtagataatctgtttgagaggatg 120
||||||||||||||||| || |||||||||||||| |||| |||||| |||||||||||
Sbjct: 210 tcatttgagttcttcccccccaagactgaagatggagtagttaatctacttgagaggatg 269
Query: 121 gaccgcatggtggcccacaatccttcattttgtgatatcacttggggtgctggaggatca 180
||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 270 gaccgtatggtggctcacagtccttcattttgtgatattacttggggtgctggaggatca 329
Query: 181 accgctgatgtaactttggaaattgccaacaagatgcagaacattgtgtgtgtggaaacc 240
||||| |||||||| || || |||||||| ||||||||||| | || |||||||||||
Sbjct: 330 accgcggatgtaacattagatattgccaaaaagatgcagaataccgtaggtgtggaaacc 389
Query: 241 atgatccacctcacctgcaccaacatgcctgttgagaagattgacaatgcactccagaca 300
||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 390 atgatgcacctcacctgcaccaacatgcctgttgagaagattgacgatgctctcgagacc 449
Query: 301 atcaagtccaatggcctccagaacgtgcttgctcttcgaggcgatcccccacatggtcag 360
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 450 atcaagtccaatggcctccagaatgtgcttgctcttcgaggtgatcccccacatggtcag 509
Query: 361 gacaaatttgtccagacagaaggtggctttgcctgcgcacg 401
|||||||| |||||| ||||||||||||||||| |||||
Sbjct: 510 gacaaattcgtccaggtcgaaggtggctttgcctgtgcacg 550
>gnl|LJGI|AV766388 weakly similar to UniRef100_O80585 Cluster:
Methylenetetrahydrofolate reductase 2; n=1; Arabidopsis
thaliana|Rep: Methylenetetrahydrofolate reductase 2 -
Arabidopsis thaliana (Mouse-ear cress), partial (8%)
Length = 846
Score = 54.0 bits (27), Expect = 2e-06
Identities = 90/111 (81%)
Strand = Plus / Minus
Query: 664 ggcattatgcccattaataattacaagggctttatccgcatgactggtttttgtaagaca 723
|||||||||||||| ||| ||| || |||| | ||| ||||| ||||| |||||| ||
Sbjct: 444 ggcattatgcccatcaatgatttcatgggcatgatcggcatgtgtggttcttgtaaacca 385
Query: 724 aagatacctgctgagattatggctgctttagagcctatcaaggataatgaa 774
|||| |||| | ||| |||||| | |||| ||||| |||||||| ||||||
Sbjct: 384 aagaaacctacggaggttatggatcctttcgagcccatcaaggacaatgaa 334