Miyakogusa Predicted Gene

Lj3g3v3236670.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3236670.1 Non Chatacterized Hit- tr|J3LJ15|J3LJ15_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G1,27.51,4e-18,DUF3527,Protein of unknown function DUF3527;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.45525.1
         (2613 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70445 weakly similar to UniRef100_Q981E2 Cluster: Rib...   513   e-144

>gnl|LJGI|TC70445 weakly similar to UniRef100_Q981E2 Cluster: Ribokinase; n=1;
            Sulfolobus solfataricus|Rep: Ribokinase - Sulfolobus
            solfataricus, partial (7%)
          Length = 558

 Score =  513 bits (259), Expect = e-144
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2355 accctttcagcatggaatatattcaatagcatatgatccatcactcacacttttgcaagc 2414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    accctttcagcatggaatatattcaatagcatatgatccatcactcacacttttgcaagc 60

                                                                        
Query: 2415 attctccatcagcatagcattactggacagtaagatgccacatgggctttctggatcaag 2474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   attctccatcagcatagcattactggacagtaagatgccacatgggctttctggatcaag 120

                                                                        
Query: 2475 aagctccattgaagggaaaattccaagagagacactagtggcgcaaaccgaggaactaga 2534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aagctccattgaagggaaaattccaagagagacactagtggcgcaaaccgaggaactaga 180

                                                                        
Query: 2535 ggcttttgggaaattggaggacattcctgcaagttttgtttcttatccaccggtctctcc 2594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ggcttttgggaaattggaggacattcctgcaagttttgtttcttatccaccggtctctcc 240

                               
Query: 2595 tgttggtagggtctaatat 2613
            |||||||||||||||||||
Sbjct: 241  tgttggtagggtctaatat 259