Miyakogusa Predicted Gene
- Lj3g3v3154040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3154040.1 gi|4138130|emb|AJ011828.1|.path2.1
(1980 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64236 UniRef100_Q9ZRY4 Cluster: NDX1 homeobox protein... 3917 0.0
gnl|LJGI|NP459451 GB|AJ011830.1|CAA09793.1 NDX3 protein [Lotus j... 620 e-177
gnl|LJGI|NP459452 GB|AJ011829.1|CAA09792.1 NDX2 homeobox protein... 492 e-138
>gnl|LJGI|TC64236 UniRef100_Q9ZRY4 Cluster: NDX1 homeobox protein; n=1; Lotus
japonicus|Rep: NDX1 homeobox protein - Lotus japonicus,
complete
Length = 3305
Score = 3917 bits (1976), Expect = 0.0
Identities = 1979/1980 (99%)
Strand = Plus / Plus
Query: 1 atgctgtccattctgctgattttgtgtgaagccgaaagcctttcttttcttgatgaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 atgctgtccattctgctgattttgtgtgaagccgaaagcctttcttttcttgatgaagtt 1093
Query: 61 gccagctcacaacaaagtttagatttggctaaatctgttgcattggaggtttttgacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gccagctcacaacaaagtttagatttggctaaatctgttgcattggaggtttttgacttg 1153
Query: 121 ttaaagactacttttggaagaaatcctgggcatttcactactgctgacagaagttatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 ttaaagactacttttggaagaaatcctgggcatttcactactgctgacagaagttatcca 1213
Query: 181 atggggcatttacagcttaatgccatgcgtctagctgacatcttctctgatgactcaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 atggggcatttacagcttaatgccatgcgtctagctgacatcttctctgatgactcaaac 1273
Query: 241 ttccgatcttacatgacagtttgtttcactaaagttctgacggcaataatatctctctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 ttccgatcttacatgacagtttgtttcactaaagttctgacggcaataatatctctctcc 1333
Query: 301 catggagattttttatcctgttggtgttcatctaacctcccagaaatagaggaggatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 catggagattttttatcctgttggtgttcatctaacctcccagaaatagaggaggatgca 1393
Query: 361 agtcttgaatatgatacatttgctgccgtcggatgggttttggataatacttcatcacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 agtcttgaatatgatacatttgctgccgtcggatgggttttggataatacttcatcacag 1453
Query: 421 gatctaccgaatgcaacaattttggaattcaatctagtacctaacagagtgtcttctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 gatctaccgaatgcaacaattttggaattcaatctagtacctaacagagtgtcttctgtc 1513
Query: 481 tcttatgcacatcataggacatcattttttgtcaagatcattgcaaatcttcattgtttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 tcttatgcacatcataggacatcattttttgtcaagatcattgcaaatcttcattgtttt 1573
Query: 541 gttcccaacatatgtgaagaacaagagaggaacctttttgttctcaaggtcctggagtac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 gttcccaacatatgtgaagaacaagagaggaacctttttgttctcaaggtcctggagtac 1633
Query: 601 ttgcaaatggatctatctaatttgctgcctgggttttcttttgcttctgatgttcctaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 ttgcaaatggatctatctaatttgctgcctgggttttcttttgcttctgatgttcctaaa 1693
Query: 661 gctgccactgtcagcaagaacctacgctctttactaagtcatgcagaatctttgattccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 gctgccactgtcagcaagaacctacgctctttactaagtcatgcagaatctttgattccg 1753
Query: 721 aaatttttaaatgaggaggatgtacatcttctaagggtgtttcttggtgaattacaatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 aaatttttaaatgaggaggatgtacatcttctaagggtgtttcttggtgaattacaatca 1813
Query: 781 ctatttacttctactggcattgggggaaatcatgttcaggataacaaatttgaagagtta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 ctatttacttctactggcattgggggaaatcatgttcaggataacaaatttgaagagtta 1873
Query: 841 tcttgggataagttttctaaactcgtcaacaaacattatcaggaggctcatagtacagcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1874 tcttgggataagttttctaaactcgtcaacaaacattatcaggaggctcatagtacagcg 1933
Query: 901 cgatgctcatcgcttatacaacaagaaccttctgaacttagtaagaaaggaggtaacttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1934 cgatgctcatcgcttatacaacaagaaccttctgaacttagtaagaaaggaggtaacttg 1993
Query: 961 aaggagggaatgtctgagaattcttcatttccaggcacaggccagtgtactaccagagct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1994 aaggagggaatgtctgagaattcttcatttccaggcacaggccagtgtactaccagagct 2053
Query: 1021 gaaatcacaaatctcggtaatgacctaagtaggcaagatcaggtagaagataaagacata 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 gaaatcacaaatctcggtaatgacctaagtaggcaagatcaggtagaagataaagacata 2113
Query: 1081 gctggtaaaactgtgtcaagaggagcaagagattttgacaaggattgtcaaaatgctgaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 gctggtaaaactgtgtcaagaggagcaagagattttgacaaggattgtcaaaatgctgaa 2173
Query: 1141 acaagcagttcagatactagttctgcaaaaggaaagagtgttattgatcatatggatagc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2174 acaagcagttcagatactagttctgcaaaaggaaagagtgttattgatcatatggatagc 2233
Query: 1201 ggggagctctcaaaatcggttgcgcatcctaaaaaagttacagttggagaaactccagag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2234 ggggagctctcaaaatcggttgcgcatcctaaaaaagttacagttggagaaactccagag 2293
Query: 1261 gatgaaaaggttgaaactgtaccgaggagaaaacgaaaacgaactataatgaatgatgaa 1320
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2294 gatgaaaaggttgaaactgtacccaggagaaaacgaaaacgaactataatgaatgatgaa 2353
Query: 1321 caggtgatgttgattgagagggcactcttggatgagcctgatatgcagcgaaatgcagct 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2354 caggtgatgttgattgagagggcactcttggatgagcctgatatgcagcgaaatgcagct 2413
Query: 1381 tcacttcaatcatgggctgataaattaagtctccatggttctgatgttacaccttctcag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2414 tcacttcaatcatgggctgataaattaagtctccatggttctgatgttacaccttctcag 2473
Query: 1441 attaaaaattggttgaacaatcgaaaagctaggctagctcgcacagctaaggatgttcca 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2474 attaaaaattggttgaacaatcgaaaagctaggctagctcgcacagctaaggatgttcca 2533
Query: 1501 gccgcagatgtggctaaatcagtgccagataagccaagaggtcctagtctagggccctat 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2534 gccgcagatgtggctaaatcagtgccagataagccaagaggtcctagtctagggccctat 2593
Query: 1561 gcctcacctgacaattatggcgatgcatcaaatgcaagacaagatcttcttagtctcgca 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2594 gcctcacctgacaattatggcgatgcatcaaatgcaagacaagatcttcttagtctcgca 2653
Query: 1621 aaaatagcttctggcgataaccctgaaccttcactggctgaactgaaggctgaactagtt 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2654 aaaatagcttctggcgataaccctgaaccttcactggctgaactgaaggctgaactagtt 2713
Query: 1681 gatgcgcctccagaaattgttcgctgcaatgtgggtcagcatgttgtgctcacagatacg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2714 gatgcgcctccagaaattgttcgctgcaatgtgggtcagcatgttgtgctcacagatacg 2773
Query: 1741 cgaggaaaggaaattggcagagggaaggtagtgcaggtgcaaggcaagtggtatgctaag 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2774 cgaggaaaggaaattggcagagggaaggtagtgcaggtgcaaggcaagtggtatgctaag 2833
Query: 1801 agcttggaggaatcggagacctatgttgtggatgttattgagctaaagactgataaagag 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2834 agcttggaggaatcggagacctatgttgtggatgttattgagctaaagactgataaagag 2893
Query: 1861 acgcgggtaccctatccatcagaagctactggcacttcatttgcagaggctgctagtaag 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2894 acgcgggtaccctatccatcagaagctactggcacttcatttgcagaggctgctagtaag 2953
Query: 1921 ttaggggtcatgagagtgttatggagtcctcgcagaataatcgcactgcagtcttaatga 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2954 ttaggggtcatgagagtgttatggagtcctcgcagaataatcgcactgcagtcttaatga 3013
>gnl|LJGI|NP459451 GB|AJ011830.1|CAA09793.1 NDX3 protein [Lotus japonicus]
Length = 946
Score = 620 bits (313), Expect = e-177
Identities = 445/489 (91%)
Strand = Plus / Plus
Query: 518 tcattgcaaatcttcattgttttgttcccaacatatgtgaagaacaagagaggaaccttt 577
|||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 1 tcattgcaaatcttcattgtttggttcccaacatatgtgaagcacaagagatgaaccttt 60
Query: 578 ttgttctcaaggtcctggagtacttgcaaatggatctatctaatttgctgcctgggtttt 637
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttctcagggtcctggaatacttgcaaatggatctatctaatttgctgcctgggtttt 120
Query: 638 cttttgcttctgatgttcctaaagctgccactgtcagcaagaacctacgctctttactaa 697
| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 121 cgtttgcttctgatgttcctaaagctgcctctgtcagcaagaatctacgccctttactaa 180
Query: 698 gtcatgcagaatctttgattccgaaatttttaaatgaggaggatgtacatcttctaaggg 757
|| ||||||||||||||||| |||| || ||||||||||||||||||||||||||| |
Sbjct: 181 gttatgcagaatctttgattacgaacttactaaatgaggaggatgtacatcttctaaaag 240
Query: 758 tgtttcttggtgaattacaatcactatttacttctactggcattgggggaaatcatgttc 817
|||| ||||| |||| ||||||| |||| |||||| ||||||||||| ||||| | ||||
Sbjct: 241 tgttgcttggcgaatcacaatcattattcacttctcctggcattgggagaaatgaggttc 300
Query: 818 aggataacaaatttgaagagttatcttgggataagttttctaaactcgtcaacaaacatt 877
|||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 301 aggataacgaattggaagagttatcttgggataagttttctcaactcgtcaacaaacatt 360
Query: 878 atcaggaggctcatagtacagcgcgatgctcatcgcttatacaacaagaaccttctgaac 937
||||||||||||||||| || |||||||||||| ||||||||| |||||||||||| ||
Sbjct: 361 atcaggaggctcatagtgtagtgcgatgctcatcacttatacaagaagaaccttctgtac 420
Query: 938 ttagtaagaaaggaggtaacttgaaggagggaatgtctgagaattcttcatttccaggca 997
|| |||||||||| || || ||||||||| |||||||||||| ||||| || |||| ||
Sbjct: 421 ttggtaagaaagggggcaagttgaaggagagaatgtctgagacttctttatgtccaagct 480
Query: 998 caggccagt 1006
|||||||||
Sbjct: 481 caggccagt 489
>gnl|LJGI|NP459452 GB|AJ011829.1|CAA09792.1 NDX2 homeobox protein [Lotus japonicus]
Length = 2488
Score = 492 bits (248), Expect = e-138
Identities = 653/788 (82%), Gaps = 15/788 (1%)
Strand = Plus / Plus
Query: 10 attctgctgattttgtgtgaagccgaaagcctttcttttcttgatgaagttgccagctca 69
||||| |||| |||||||||||| ||||| |||||| ||||||||||| |||||||||
Sbjct: 556 attcttctgagtttgtgtgaagcggaaagaatttcttaccttgatgaagtcgccagctca 615
Query: 70 caacaaagtttagatttggctaaatctgttgcattggaggtttttgacttgttaaagact 129
|||||||||||||||||||||||||||||| || ||||| ||||||||||| || |
Sbjct: 616 acacaaagtttagatttggctaaatctgttgctttagaggtctttgacttgttgaaaaaa 675
Query: 130 acttttggaagaaatcctgggcatttcactactgctgacagaagttatccaatggggcat 189
|||||| ||| |||||||||| || |||||| || |||| |||||||||||| |
Sbjct: 676 gcttttgatagagatcctgggcacatccctactg---accaaagtcatccaatggggctt 732
Query: 190 ttacagcttaatgccatgcgtctagctgacatcttctctgatgactcaaacttccgatct 249
||||||| ||||| |||||||||| ||| |||||||||||||| |||||||| |||||
Sbjct: 733 gtacagctcaatgcaatgcgtctagttgaaatcttctctgatgattcaaactttcgatcc 792
Query: 250 tacatgacagtttgtttcactaaagttctgacggcaataatatctctctcccatggagat 309
||||||||| ||||||| |||||||||| || || |||| || |||||||||||||||
Sbjct: 793 tacatgacactttgttttgctaaagttcttacagctgtaatttcactctcccatggagat 852
Query: 310 tttttatcctgttggtgttcatctaacctcccagaaatagaggaggatgcaagtcttgaa 369
||||| |||||||||||||||||||| |||||||| | ||||||||||||||| ||||||
Sbjct: 853 tttttgtcctgttggtgttcatctaatctcccagagacagaggaggatgcaagccttgaa 912
Query: 370 tatgatacatttgctgccgtcggatgggttttggataatacttcatcacaggatctaccg 429
||||||| ||||||||| || |||||| |||||||||||||| |||| ||| || |
Sbjct: 913 tatgatatatttgctgcagttggatggattttggataatact---tcacctgatgtaagg 969
Query: 430 aatgcaacaattttggaattcaatctagtacctaacagagtgtcttctgtctcttatgca 489
|| | ||| |||||||||||||||| | |||| | | || | | |||| |||
Sbjct: 970 aaggtcacagatttggaattcaatctaatccctataacaatgcccagggcttcttttgct 1029
Query: 490 catcataggacatcattttttgtcaagatcattgcaaatcttcattgttttgttcccaac 549
||||||||||||||||| ||||| || || ||||||||||||| |||||||||||||||
Sbjct: 1030 catcataggacatcattatttgtgaaattctttgcaaatcttcactgttttgttcccaac 1089
Query: 550 atatgtgaagaacaagagaggaacctttttgttctcaaggtcctggagtacttgcaaatg 609
|||||||||||||| || ||||||||||| |||||||||||| |||||| ||||||||||
Sbjct: 1090 atatgtgaagaacaggaaaggaaccttttcgttctcaaggtcttggagtgcttgcaaatg 1149
Query: 610 gatctatctaatttgctgcctgggttttcttttgcttctgatgttcctaaagctgccact 669
|||| | | || |||||||||||||||||||||||||||||| |||| |||
Sbjct: 1150 gatcaaaccaacttgctgcctgggttttcttttgcttctgatactcct---------act 1200
Query: 670 gtcagcaagaacctacgctctttactaagtcatgcagaatctttgattccgaaattttta 729
| | | |||||||| ||||| || |||||||||| |||||||||||||| | || |||
Sbjct: 1201 gcctggaagaacctccgctcgttgataagtcatgccgaatctttgattccaaccttctta 1260
Query: 730 aatgaggaggatgtacatcttctaagggtgtttcttggtgaattacaatcactatttact 789
|||| ||||||||| | ||| |||||| |||| || ||||||| |||||||| |||| |
Sbjct: 1261 aatgcggaggatgtgcgacttttaagggcgttttttagtgaattgcaatcactgtttatt 1320
Query: 790 tctactgg 797
||| ||||
Sbjct: 1321 tctgctgg 1328
Score = 256 bits (129), Expect = 5e-67
Identities = 210/237 (88%)
Strand = Plus / Plus
Query: 1262 atgaaaaggttgaaactgtaccgaggagaaaacgaaaacgaactataatgaatgatgaac 1321
|||||||| ||||| || || ||||| || |||||| ||||||||||||||||||||||
Sbjct: 1637 atgaaaagattgaacttgcactgaggaaaacacgaaagcgaactataatgaatgatgaac 1696
Query: 1322 aggtgatgttgattgagagggcactcttggatgagcctgatatgcagcgaaatgcagctt 1381
||||| | ||||||||| ||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 1697 aggtgttactgattgagaaggcactcttaaatgagcctgatatgcagcgtaatgcagctt 1756
Query: 1382 cacttcaatcatgggctgataaattaagtctccatggttctgatgttacaccttctcaga 1441
||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||
Sbjct: 1757 cacttcaatcatgggctgataaattaagtgctcatggttctgaggttacatcttcacagc 1816
Query: 1442 ttaaaaattggttgaacaatcgaaaagctaggctagctcgcacagctaaggatgttc 1498
||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 1817 ttaaaaactggttgaacaatcgaaaggctaggctagctcgcacgcgtaaggatgttc 1873
Score = 77.8 bits (39), Expect = 2e-13
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1137 tgaaacaagcagttcagatactagttctgcaaaaggaaagagtgttattgatcatatgga 1196
||||||||| ||||||||||||||||||| |||||||||| |||| |||| ||||||||
Sbjct: 1554 tgaaacaagtggttcagatactagttctgctaaaggaaagaatgttgttgaccatatgga 1613
Query: 1197 tag 1199
|||
Sbjct: 1614 tag 1616
Score = 58.0 bits (29), Expect = 2e-07
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 1824 tgttgtggatgttattgagctaaagactgataaagagacgcgggtaccctatccatcaga 1883
||||||||||||| |||||| ||| |||||| | | || || ||| ||| ||||||||
Sbjct: 2070 tgttgtggatgtttatgagcttaaggttgataacgggtcgtggctactctacccatcaga 2129
Query: 1884 agctactggcacttcatttgcagaggctgctagtaagttaggggtcatgagagtgttatg 1943
||| || ||||| |||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 2130 agccaccggcaccacatttgcagacgctgaagaaaagttaggtgtcatgagagtgttatg 2189
Query: 1944 g 1944
|
Sbjct: 2190 g 2190