Miyakogusa Predicted Gene

Lj3g3v3069070.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3069070.1 CUFF.45222.1
         (301 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75660 similar to UniRef100_A7PQU3 Cluster: Chromosome...   214   2e-55
gnl|LJGI|AV427150 similar to UniRef100_A7PQU3 Cluster: Chromosom...   119   1e-26

>gnl|LJGI|TC75660 similar to UniRef100_A7PQU3 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 766

 Score =  214 bits (108), Expect = 2e-55
 Identities = 108/108 (100%)
 Strand = Plus / Minus

                                                                       
Query: 123 aagaagaaatggaaggtgtgagtctgcaattgcaaaccctaacgcgacggaggaggaaga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagaagaaatggaaggtgtgagtctgcaattgcaaaccctaacgcgacggaggaggaaga 51

                                                           
Query: 183 tgaaggaggagatacccgacgagagaaagcaatatgtcaaagtctagt 230
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  tgaaggaggagatacccgacgagagaaagcaatatgtcaaagtctagt 3


>gnl|LJGI|AV427150 similar to UniRef100_A7PQU3 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 414

 Score =  119 bits (60), Expect = 1e-26
 Identities = 60/60 (100%)
 Strand = Plus / Minus

                                                                       
Query: 123 aagaagaaatggaaggtgtgagtctgcaattgcaaaccctaacgcgacggaggaggaaga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  aagaagaaatggaaggtgtgagtctgcaattgcaaaccctaacgcgacggaggaggaaga 1