Miyakogusa Predicted Gene

Lj3g3v2888360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2888360.1 Non Chatacterized Hit- tr|B9TC41|B9TC41_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,77.59,5e-18,DUF1218,Protein of unknown function DUF1218;
seg,NULL,CUFF.44884.1
         (483 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76746 similar to UniRef100_A7PXL7 Cluster: Chromosome...   837   0.0  

>gnl|LJGI|TC76746 similar to UniRef100_A7PXL7 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (80%)
          Length = 637

 Score =  837 bits (422), Expect = 0.0
 Identities = 422/422 (100%)
 Strand = Plus / Plus

                                                                       
Query: 62  ggattcttgccttccaagctgaaatagcacaaaacaaggtcaagcatttaagactgtgga 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggattcttgccttccaagctgaaatagcacaaaacaaggtcaagcatttaagactgtgga 60

                                                                       
Query: 122 tatttgagtgtagagaaccaagtcatcaagccttcatgctgggtttgggtgcagcagtgc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatttgagtgtagagaaccaagtcatcaagccttcatgctgggtttgggtgcagcagtgc 120

                                                                       
Query: 182 ttttaggactagcccatgctattgccaatttgctaggtggctgcagttgcatttgttctc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttaggactagcccatgctattgccaatttgctaggtggctgcagttgcatttgttctc 180

                                                                       
Query: 242 aacaagagtttgagaaagctgcccccagtaggcaactctcagtggcttgccttattttaa 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacaagagtttgagaaagctgcccccagtaggcaactctcagtggcttgccttattttaa 240

                                                                       
Query: 302 cttgggtcctgttggccgttggattgtccatgctagtgataggggctttgtcaaacaaca 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgggtcctgttggccgttggattgtccatgctagtgataggggctttgtcaaacaaca 300

                                                                       
Query: 362 gatcagacggttcctgtggtttatcacaccatcacttcctgtccattggtgggatttcat 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcagacggttcctgtggtttatcacaccatcacttcctgtccattggtgggatttcat 360

                                                                       
Query: 422 gttttgttcatggcctattctgtgttgcatattacgtttctgccacttcctccatggatt 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttttgttcatggcctattctgtgttgcatattacgtttctgccacttcctccatggatt 420

             
Query: 482 ag 483
           ||
Sbjct: 421 ag 422