Miyakogusa Predicted Gene

Lj3g3v2576350.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2576350.1 Non Chatacterized Hit- tr|I1NFA1|I1NFA1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,31.27,3e-17,DNA-binding pseudobarrel domain,DNA-binding
pseudobarrel domain; B3,B3 DNA binding domain; seg,NULL;,CUFF.44242.1
         (1464 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP038008 similar to UniRef100_A4AC32 Cluster: Transfera...   111   1e-23

>gnl|LJGI|BP038008 similar to UniRef100_A4AC32 Cluster: Transferase; n=1;
           Congregibacter litoralis KT71|Rep: Transferase -
           Congregibacter litoralis KT71, partial (6%)
          Length = 509

 Score =  111 bits (56), Expect = 1e-23
 Identities = 234/292 (80%), Gaps = 6/292 (2%)
 Strand = Plus / Plus

                                                                       
Query: 39  tgaatgcagccttcaaaaaggggtgttgaggatgccgaggaggtttgttagtaaacattg 98
           ||||| |||||||||||| ||||||||||| ||||| |||| | |||| |||||||||||
Sbjct: 1   tgaatacagccttcaaaacggggtgttgagaatgccaaggaagcttgtgagtaaacattg 60

                                                                       
Query: 99  gatcaatgcaagaatttcaaacccagtagctcttttgcttcctggtgaaaggtggaaagt 158
           |    |||   |||| ||||||||  || ||||||||||||||||||  |  ||| ||||
Sbjct: 61  gg---atg---gaatctcaaaccctatatctcttttgcttcctggtgctacatgggaagt 114

                                                                       
Query: 159 tacttggaaaaaacatggttctgatgttatcatgtttggagatcattggaaggaatttac 218
            |  ||| |||||| ||||| ||| ||||||||||| || ||| | |||||| | ||| |
Sbjct: 115 aagatgggaaaaacgtggttatgacgttatcatgttaggggatgaatggaagaattttgc 174

                                                                       
Query: 219 agagttttattctttggatgtggaacattctttgtggttttctttcaggaacgattcacg 278
           |  |  |||||||||||||||||||||||  ||| |||| || |||||| | ||||||| 
Sbjct: 175 aatgcattattctttggatgtggaacatttattgaggttctccttcaggcatgattcaca 234

                                                               
Query: 279 tgttcgaggaacacaattcaaagttaggatacatgaatctggcttggaaata 330
           |||| || ||||||| ||  | |||  |||||||||||||||| ||||||||
Sbjct: 235 tgttagaagaacacagtttcatgttgagatacatgaatctggcatggaaata 286