Miyakogusa Predicted Gene
- Lj3g3v2518940.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2518940.2 Non Chatacterized Hit- tr|D7KQB8|D7KQB8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,34.16,0.000000003,no description,Homeodomain-like; PREDICTED:
SIMILAR TO SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPEN,CUFF.44125.2
(1314 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS337873 similar to UniRef100_Q8L5P7 Cluster: LHY prote... 886 0.0
gnl|LJGI|FS340397 homologue to UniRef100_Q8L5P7 Cluster: LHY pro... 634 0.0
gnl|LJGI|TC63561 homologue to UniRef100_Q0PJC5 Cluster: MYB tran... 321 6e-87
gnl|LJGI|GO024698 similar to UniRef100_Q0PJC5 Cluster: MYB trans... 301 6e-81
>gnl|LJGI|FS337873 similar to UniRef100_Q8L5P7 Cluster: LHY protein; n=1; Phaseolus
vulgaris|Rep: LHY protein - Phaseolus vulgaris (Kidney
bean) (French bean), partial (19%)
Length = 739
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 1 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 352
Query: 61 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 412
Query: 121 aagctacatgggcgagcatggcagcgcatagaagagcatataggaacaaagtctgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aagctacatgggcgagcatggcagcgcatagaagagcatataggaacaaagtctgctgtg 472
Query: 181 caaatcaggagccatgcacagaagttctttactaagttggagaaagaggccctggtgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caaatcaggagccatgcacagaagttctttactaagttggagaaagaggccctggtgaag 532
Query: 241 ggtgttccaattggacaagctattgatattgacattccccctccaaggcctaaaagaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggtgttccaattggacaagctattgatattgacattccccctccaaggcctaaaagaaaa 592
Query: 301 ccaagcaatccttatcctcggaagtcgagtgctgtcactgcaacattacaaagtggagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccaagcaatccttatcctcggaagtcgagtgctgtcactgcaacattacaaagtggagaa 652
Query: 361 aaggatgtaaaactcaattcagtggaatcttcgcatgttgaatcttcgcatgttaaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aaggatgtaaaactcaattcagtggaatcttcgcatgttgaatcttcgcatgttaaacta 712
Query: 421 acactggacttggaaaaagagccactt 447
|||||||||||||||||||||||||||
Sbjct: 713 acactggacttggaaaaagagccactt 739
>gnl|LJGI|FS340397 homologue to UniRef100_Q8L5P7 Cluster: LHY protein; n=1; Phaseolus
vulgaris|Rep: LHY protein - Phaseolus vulgaris (Kidney
bean) (French bean), partial (14%)
Length = 650
Score = 634 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Plus
Query: 1 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 390
Query: 61 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 450
Query: 121 aagctacatgggcgagcatggcagcgcatagaagagcatataggaacaaagtctgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagctacatgggcgagcatggcagcgcatagaagagcatataggaacaaagtctgctgtg 510
Query: 181 caaatcaggagccatgcacagaagttctttactaagttggagaaagaggccctggtgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 caaatcaggagccatgcacagaagttctttactaagttggagaaagaggccctggtgaag 570
Query: 241 ggtgttccaattggacaagctattgatattgacattccccctccaaggcctaaaagaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggtgttccaattggacaagctattgatattgacattccccctccaaggcctaaaagaaaa 630
Query: 301 ccaagcaatccttatcctcg 320
||||||||||||||||||||
Sbjct: 631 ccaagcaatccttatcctcg 650
>gnl|LJGI|TC63561 homologue to UniRef100_Q0PJC5 Cluster: MYB transcription factor
MYB114; n=1; Glycine max|Rep: MYB transcription factor
MYB114 - Glycine max (Soybean), partial (30%)
Length = 721
Score = 321 bits (162), Expect = 6e-87
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 1 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 619
Query: 61 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 679
Query: 121 aagctacatgggcgagcatggcagcgcatagaagagcatata 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagctacatgggcgagcatggcagcgcatagaagagcatata 721
>gnl|LJGI|GO024698 similar to UniRef100_Q0PJC5 Cluster: MYB transcription factor
MYB114; n=1; Glycine max|Rep: MYB transcription factor
MYB114 - Glycine max (Soybean), partial (29%)
Length = 675
Score = 301 bits (152), Expect = 6e-81
Identities = 155/156 (99%)
Strand = Plus / Plus
Query: 1 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca 356
Query: 61 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg 416
Query: 121 aagctacatgggcgagcatggcagcgcatagaagag 156
|||||||||||||||||||||||||||| |||||||
Sbjct: 417 aagctacatgggcgagcatggcagcgcacagaagag 452