Miyakogusa Predicted Gene

Lj3g3v2317900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2317900.1 Non Chatacterized Hit- tr|E9CGW1|E9CGW1_CAPO3
Putative uncharacterized protein OS=Capsaspora owczarz,41.67,5e-19,no
description,NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
assembly factor 3; DUF498,NADH deh,CUFF.43837.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61499 similar to UniRef100_A7PK19 Cluster: Chromosome...  1011   0.0  

>gnl|LJGI|TC61499 similar to UniRef100_A7PK19 Cluster: Chromosome chr15 scaffold_19,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_19, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 756

 Score = 1011 bits (510), Expect = 0.0
 Identities = 510/510 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgatcaagcaaagacttccaaacctgatacgcactctccgcaatgaacaacctctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atgtcgatcaagcaaagacttccaaacctgatacgcactctccgcaatgaacaacctctc 106

                                                                       
Query: 61  aagcctcaacaaaaccatgccttaccttctctccgtcgcgctttctctctctacgatcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aagcctcaacaaaaccatgccttaccttctctccgtcgcgctttctctctctacgatcag 166

                                                                       
Query: 121 atcaacgtcattgacaaactccccgatgaccagcttcgctttcaagggtatagtgatacg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atcaacgtcattgacaaactccccgatgaccagcttcgctttcaagggtatagtgatacg 226

                                                                       
Query: 181 gggtttactgtaaatagagttgaatatgaaggaagcttgctttgtgttggaaatttgctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gggtttactgtaaatagagttgaatatgaaggaagcttgctttgtgttggaaatttgctc 286

                                                                       
Query: 241 ttgtcttggaaacccaacaagttttcagaaatcactgctgatagcttgtcactcttccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttgtcttggaaacccaacaagttttcagaaatcactgctgatagcttgtcactcttccaa 346

                                                                       
Query: 301 attgttcgccctattccagagatactgattcttggctgtggaaggaacattcagcctgta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 attgttcgccctattccagagatactgattcttggctgtggaaggaacattcagcctgta 406

                                                                       
Query: 361 gatcctgaacttagaaagtttattcggtctaccggcatgaagttagaagctgttgactcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gatcctgaacttagaaagtttattcggtctaccggcatgaagttagaagctgttgactcg 466

                                                                       
Query: 421 agaaatgctgcatcaacttacaacatactgaatgaagaaggtcgtattgtggctgctgcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agaaatgctgcatcaacttacaacatactgaatgaagaaggtcgtattgtggctgctgcg 526

                                         
Query: 481 cttcttccgcatggtgtttcttcatgaaac 510
           ||||||||||||||||||||||||||||||
Sbjct: 527 cttcttccgcatggtgtttcttcatgaaac 556