Miyakogusa Predicted Gene
- Lj3g3v2236900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2236900.1 Non Chatacterized Hit- tr|I1KVA5|I1KVA5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57371
PE,81.14,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.43743.1
(1408 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61544 similar to UniRef100_A7P7N1 Cluster: Chromosome... 1344 0.0
gnl|LJGI|TC62491 similar to UniRef100_A7P7N1 Cluster: Chromosome... 1072 0.0
gnl|LJGI|TC81935 similar to UniRef100_A7P7N1 Cluster: Chromosome... 515 e-145
gnl|LJGI|FS353154 similar to UniRef100_A7P5I3 Cluster: Chromosom... 72 1e-11
gnl|LJGI|FS326841 similar to UniRef100_A7P5I3 Cluster: Chromosom... 66 6e-10
gnl|LJGI|TC64600 weakly similar to UniRef100_A9RP81 Cluster: Pre... 54 2e-06
>gnl|LJGI|TC61544 similar to UniRef100_A7P7N1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 755
Score = 1344 bits (678), Expect = 0.0
Identities = 678/678 (100%)
Strand = Plus / Plus
Query: 1 atggcacacgccatctccaacgagcaaaccgaaatgtcaaccaccaccacacccctcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcacacgccatctccaacgagcaaaccgaaatgtcaaccaccaccacacccctcctc 137
Query: 61 caccgccacctcctctccggcgtcaaactcagaacctccatctgggccgaactctccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 caccgccacctcctctccggcgtcaaactcagaacctccatctgggccgaactctccggc 197
Query: 121 gcggtgggggacttaggcacctacatccccatcgtcctcgccctctctctagtcaacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gcggtgggggacttaggcacctacatccccatcgtcctcgccctctctctagtcaacaac 257
Query: 181 cttgacctcaccaccacactcttcttcaccgcactctacaacatctccactggcctcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cttgacctcaccaccacactcttcttcaccgcactctacaacatctccactggcctcctc 317
Query: 241 ttcggcctccccatgccagtccagcccatgaagtccatcgccgccgtcgccatctccgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttcggcctccccatgccagtccagcccatgaagtccatcgccgccgtcgccatctccgaa 377
Query: 301 acacccccactcaccatcccccagatctccgccgccggcctctccgtcgccgccgtactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acacccccactcaccatcccccagatctccgccgccggcctctccgtcgccgccgtactt 437
Query: 361 ctcatcctcggctccaccggtctcatgtccgtcctctaccgctacctccctctgccagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctcatcctcggctccaccggtctcatgtccgtcctctaccgctacctccctctgccagtc 497
Query: 421 gtccgcggcgttcagctctcccaggggctcaacttcgccatgtccgccgtcaagtacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtccgcggcgttcagctctcccaggggctcaacttcgccatgtccgccgtcaagtacatc 557
Query: 481 cgcttccagcaagacctcgccacctccaaatcgggtcctccgcgaacgtggctcggcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cgcttccagcaagacctcgccacctccaaatcgggtcctccgcgaacgtggctcggcctc 617
Query: 541 gacggcatcatcgtcgccctcgccgcaattctcttcctcgtcctcaccaccggcgccggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gacggcatcatcgtcgccctcgccgcaattctcttcctcgtcctcaccaccggcgccggc 677
Query: 601 gacccacctcccgaaaatcctcccccgtcatcagacgaaccttccgatcgccgtcgcaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gacccacctcccgaaaatcctcccccgtcatcagacgaaccttccgatcgccgtcgcaac 737
Query: 661 accgttcaccggaggctg 678
||||||||||||||||||
Sbjct: 738 accgttcaccggaggctg 755
>gnl|LJGI|TC62491 similar to UniRef100_A7P7N1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (36%)
Length = 1092
Score = 1072 bits (541), Expect = 0.0
Identities = 541/541 (100%)
Strand = Plus / Plus
Query: 868 attctgaattcggttattgcagtttgcaagctatctggggatttgtttcctgacagagaa 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctgaattcggttattgcagtttgcaagctatctggggatttgtttcctgacagagaa 60
Query: 928 gcttcagccatgaaggtttcagtgagtgttgggctagtgaacttcgtaggttgttggttc 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttcagccatgaaggtttcagtgagtgttgggctagtgaacttcgtaggttgttggttc 120
Query: 988 ggagccatgccttgttgtcatggagctggtggtttggctggacagtacaggtttggaggt 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggagccatgccttgttgtcatggagctggtggtttggctggacagtacaggtttggaggt 180
Query: 1048 aggagtggagcttctgtggtgtatcttgggattgccaaattgttgcttgctttggctttt 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggagtggagcttctgtggtgtatcttgggattgccaaattgttgcttgctttggctttt 240
Query: 1108 gggaattcttttgggagaatcttgggtcagtttcctgttggggttcttggggtgcttttg 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggaattcttttgggagaatcttgggtcagtttcctgttggggttcttggggtgcttttg 300
Query: 1168 ttgtttgctgggattgaattggcaatggctgctaaggacatgaacactaaacaagaggct 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgtttgctgggattgaattggcaatggctgctaaggacatgaacactaaacaagaggct 360
Query: 1228 tttgtgatgcttgtttgtgctgctgtttctcttactgggtctggtgctgctcttgggttc 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgtgatgcttgtttgtgctgctgtttctcttactgggtctggtgctgctcttgggttc 420
Query: 1288 attgttgggattgttctatacttgttgctcaagttgagggaggttgaatgtggtggtggg 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgttgggattgttctatacttgttgctcaagttgagggaggttgaatgtggtggtggg 480
Query: 1348 tttgggttttccaagaagagcaaatcttctgtggatgaggatactcccttaatggcctag 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgggttttccaagaagagcaaatcttctgtggatgaggatactcccttaatggcctag 540
Query: 1408 a 1408
|
Sbjct: 541 a 541
>gnl|LJGI|TC81935 similar to UniRef100_A7P7N1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 439
Score = 515 bits (260), Expect = e-145
Identities = 274/276 (99%), Gaps = 2/276 (0%)
Strand = Plus / Minus
Query: 1 atggcacacg-ccatctccaacga-gcaaaccgaaatgtcaaccaccaccacacccctcc 58
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 276 atggcacacgtccatctccaacgaagcaaaccgaaatgtcaaccaccaccacacccctcc 217
Query: 59 tccaccgccacctcctctccggcgtcaaactcagaacctccatctgggccgaactctccg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tccaccgccacctcctctccggcgtcaaactcagaacctccatctgggccgaactctccg 157
Query: 119 gcgcggtgggggacttaggcacctacatccccatcgtcctcgccctctctctagtcaaca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gcgcggtgggggacttaggcacctacatccccatcgtcctcgccctctctctagtcaaca 97
Query: 179 accttgacctcaccaccacactcttcttcaccgcactctacaacatctccactggcctcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 accttgacctcaccaccacactcttcttcaccgcactctacaacatctccactggcctcc 37
Query: 239 tcttcggcctccccatgccagtccagcccatgaagt 274
||||||||||||||||||||||||||||||||||||
Sbjct: 36 tcttcggcctccccatgccagtccagcccatgaagt 1
>gnl|LJGI|FS353154 similar to UniRef100_A7P5I3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 602
Score = 71.9 bits (36), Expect = 1e-11
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 1168 ttgtttgctgggattgaattggcaatggctgctaaggacatgaacactaaacaagaggct 1227
||||||||||||||||||||||| |||||| | | |||||| || || ||| | || ||
Sbjct: 422 ttgtttgctgggattgaattggccatggcttcaagggacatcaataccaaagaggattct 363
Query: 1228 tttgtgatgcttgtttgtgctgctgtttctct 1259
|||||||||||| ||||| | |||||||||||
Sbjct: 362 tttgtgatgcttatttgtacggctgtttctct 331
Score = 56.0 bits (28), Expect = 6e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 1006 catggagctggtggtttggctggacagtacaggtttggaggtaggagtggag 1057
||||| |||||||| || ||||||||||||| |||||| || ||||||||||
Sbjct: 584 catggtgctggtgggttagctggacagtacaagtttggtgggaggagtggag 533
>gnl|LJGI|FS326841 similar to UniRef100_A7P5I3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 755
Score = 65.9 bits (33), Expect = 6e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 243 cggcctccccatgccagtccagcccatgaagtccatcgccgccgtcgccatctccga 299
|||| |||||||||| || ||||||||||||||||||||||||| ||| |||||||
Sbjct: 346 cggcgtccccatgccggttcagcccatgaagtccatcgccgccgaggccctctccga 402
>gnl|LJGI|TC64600 weakly similar to UniRef100_A9RP81 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(30%)
Length = 783
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 248 tccccatgccagtccagcccatgaagtccat 278
|||||||||| ||||||||||||||||||||
Sbjct: 369 tccccatgcctgtccagcccatgaagtccat 399