Miyakogusa Predicted Gene
- Lj3g3v1953280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1953280.1 Non Chatacterized Hit- tr|C6SXK4|C6SXK4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,90.76,0,UBC-like,Ubiquitin-conjugating enzyme/RWD-like;
UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating enzyme, E,CUFF.43333.1
(360 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60054 homologue to UniRef100_A5AI12 Cluster: Ubiquiti... 341 2e-93
gnl|LJGI|TC67528 weakly similar to UniRef100_A5AI12 Cluster: Ubi... 137 5e-32
gnl|LJGI|TC72221 UniRef100_Q06H23 Cluster: Ubiquitin carrier pro... 135 2e-31
gnl|LJGI|TC59600 UniRef100_Q06H23 Cluster: Ubiquitin carrier pro... 135 2e-31
gnl|LJGI|GO012202 homologue to UniRef100_A5AP73 Cluster: Ubiquit... 121 3e-27
gnl|LJGI|TC57702 UniRef100_Q8LJR9 Cluster: Ubiquitin carrier pro... 82 3e-15
gnl|LJGI|BW597528 similar to UniRef100_Q4VSV2 Cluster: Ubiquitin... 80 1e-14
gnl|LJGI|GO024533 homologue to UniRef100_Q8LJR9 Cluster: Ubiquit... 74 6e-13
gnl|LJGI|TC69688 UniRef100_A9SDW9 Cluster: Predicted protein; n=... 70 1e-11
gnl|LJGI|TC62042 UniRef100_A9SDW9 Cluster: Predicted protein; n=... 70 1e-11
gnl|LJGI|TC75298 UniRef100_A9SDW9 Cluster: Predicted protein; n=... 64 6e-10
gnl|LJGI|TC63659 UniRef100_Q06H23 Cluster: Ubiquitin carrier pro... 54 6e-07
gnl|LJGI|GO036563 homologue to UniRef100_A5BM41 Cluster: Ubiquit... 50 9e-06
>gnl|LJGI|TC60054 homologue to UniRef100_A5AI12 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), complete
Length = 765
Score = 341 bits (172), Expect = 2e-93
Identities = 310/356 (87%)
Strand = Plus / Plus
Query: 1 atgttcaattggcaagctacaattatgggccctgcagatagcccatttgctggtggcgtg 60
|||||| ||||||||||||| ||||||||||| || |||||||||||| |||||||||||
Sbjct: 180 atgttccattggcaagctacgattatgggcccagcggatagcccatttactggtggcgtg 239
Query: 61 tttcttgcatcaattcgcttccctccagattaccctttcaaaccacccaaggttgccttc 120
||||||| |||||| |||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 240 tttcttgtgacaattcatttccctccagattatcctttcaaaccacccaaggtttcattc 299
Query: 121 cgcacaaaggttttccaccccaacattagcaacaatggtagtatttgccttgacattctc 180
||||||||||||| |||||| || || | || |||||| || |||||||||||||| |||
Sbjct: 300 cgcacaaaggtttaccaccctaatatcaacagcaatggcagcatttgccttgacatcctc 359
Query: 181 aaagaccagtggagcccggccctcacaatatccaagatcctcctttctatatgctctttg 240
||||| || |||||||| |||||||| ||||||||| | || || ||||| |||||| ||
Sbjct: 360 aaagagcaatggagccctgccctcacgatatccaaggttcttctgtctatttgctctctg 419
Query: 241 ctgacagaccccaacccagaggatcctctggtgcctgagattgctcatatgtacaagact 300
||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 420 ctgactgaccctaacccagatgatcctctggtgcctgagattgcgcatatgtacaagact 479
Query: 301 gatagggccaagtatgagagcactgcacagctgtggacccagaaatatgccatggg 356
|| || |||||||||||| ||||| | | |||||||||||||||||||||||
Sbjct: 480 gacagagccaagtatgaggctactgctcggtcatggacccagaaatatgccatggg 535
>gnl|LJGI|TC67528 weakly similar to UniRef100_A5AI12 Cluster: Ubiquitin carrier
protein; n=1; Vitis vinifera|Rep: Ubiquitin carrier
protein - Vitis vinifera (Grape), partial (96%)
Length = 763
Score = 137 bits (69), Expect = 5e-32
Identities = 240/297 (80%)
Strand = Plus / Plus
Query: 2 tgttcaattggcaagctacaattatgggccctgcagatagcccatttgctggtggcgtgt 61
||||| ||||||||||||| ||| |||||||| || |||||||| ||| |||| ||||
Sbjct: 127 tgttccattggcaagctaccattgtgggccctaaaggtagcccatatgcccgtggtgtgt 186
Query: 62 ttcttgcatcaattcgcttccctccagattaccctttcaaaccacccaaggttgccttcc 121
||||| |||||| ||| || |||||| || |||| ||||||||||||| | ||||
Sbjct: 187 ttcttttgtcaattgaattcactaaagattatcccttcataccacccaaggtttcattcc 246
Query: 122 gcacaaaggttttccaccccaacattagcaacaatggtagtatttgccttgacattctca 181
|||||||| ||||||| || ||||| | |||||||| ||||||||||||| ||||||
Sbjct: 247 gcacaaagattttccatcctaacatccataccaatggtactatttgccttgaccttctca 306
Query: 182 aagaccagtggagcccggccctcacaatatccaagatcctcctttctatatgctctttgc 241
||||| | |||||||| ||||| |||||||||||| | ||| ||| ||| |||| |||
Sbjct: 307 aagacgattggagccctgcccttacaatatccaaggttctcatttgtattgcctctctgc 366
Query: 242 tgacagaccccaacccagaggatcctctggtgcctgagattgctcatatgtacaaga 298
||||| |||||| |||||||| | || |||||||| ||||| | ||||||||||
Sbjct: 367 tgacaagtcccaacacagaggatgcagtgatgcctgaggttgctgagatgtacaaga 423
>gnl|LJGI|TC72221 UniRef100_Q06H23 Cluster: Ubiquitin carrier protein; n=2;
Papilionoideae|Rep: Ubiquitin carrier protein - Arachis
hypogaea (Peanut), complete
Length = 822
Score = 135 bits (68), Expect = 2e-31
Identities = 248/308 (80%)
Strand = Plus / Plus
Query: 10 tggcaagctacaattatgggccctgcagatagcccatttgctggtggcgtgtttcttgca 69
|||||||| ||||| ||||| ||||| |||||||||| ||| ||||| || || || |
Sbjct: 243 tggcaagccacaatcatgggacctgctgatagcccatatgcaggtggtgttttcctggtt 302
Query: 70 tcaattcgcttccctccagattaccctttcaaaccacccaaggttgccttccgcacaaag 129
|| |||| || ||||| ||||| || ||||| ||||| ||||| || || | || |||
Sbjct: 303 tcgattcattttcctcctgattatccattcaagccaccaaaggtggcatttaggactaag 362
Query: 130 gttttccaccccaacattagcaacaatggtagtatttgccttgacattctcaaagaccag 189
|| || ||||| ||||| | || ||||| ||||| |||||||||||||| ||||| |||
Sbjct: 363 gtatttcacccgaacatcaacagtaatggcagtatatgccttgacattcttaaagaacag 422
Query: 190 tggagcccggccctcacaatatccaagatcctcctttctatatgctctttgctgacagac 249
||||| || || || || || |||||| |||| || || || ||||| ||| |||| |||
Sbjct: 423 tggagtccagcactaaccatttccaaggtccttctgtcaatttgctccttgttgacggac 482
Query: 250 cccaacccagaggatcctctggtgcctgagattgctcatatgtacaagactgatagggcc 309
|||||||| || |||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 483 cccaaccccgatgatcctcttgtgcctgaaattgcgcacatgtacaagactgaccgggcc 542
Query: 310 aagtatga 317
||||||||
Sbjct: 543 aagtatga 550
>gnl|LJGI|TC59600 UniRef100_Q06H23 Cluster: Ubiquitin carrier protein; n=2;
Papilionoideae|Rep: Ubiquitin carrier protein - Arachis
hypogaea (Peanut), complete
Length = 876
Score = 135 bits (68), Expect = 2e-31
Identities = 248/308 (80%)
Strand = Plus / Plus
Query: 10 tggcaagctacaattatgggccctgcagatagcccatttgctggtggcgtgtttcttgca 69
|||||||| ||||| ||||| ||||| |||||||||| ||| ||||| || || || |
Sbjct: 248 tggcaagccacaatcatgggacctgctgatagcccatatgcaggtggtgttttcctggtt 307
Query: 70 tcaattcgcttccctccagattaccctttcaaaccacccaaggttgccttccgcacaaag 129
|| |||| || ||||| ||||| || ||||| ||||| ||||| || || | || |||
Sbjct: 308 tcgattcattttcctcctgattatccattcaagccaccaaaggtggcatttaggactaag 367
Query: 130 gttttccaccccaacattagcaacaatggtagtatttgccttgacattctcaaagaccag 189
|| || ||||| ||||| | || ||||| ||||| |||||||||||||| ||||| |||
Sbjct: 368 gtatttcacccgaacatcaacagtaatggcagtatatgccttgacattcttaaagaacag 427
Query: 190 tggagcccggccctcacaatatccaagatcctcctttctatatgctctttgctgacagac 249
||||| || || || || || |||||| |||| || || || ||||| ||| |||| |||
Sbjct: 428 tggagtccagcactaaccatttccaaggtccttctgtcaatttgctccttgttgacggac 487
Query: 250 cccaacccagaggatcctctggtgcctgagattgctcatatgtacaagactgatagggcc 309
|||||||| || |||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 488 cccaaccccgatgatcctcttgtgcctgaaattgcgcacatgtacaagactgaccgggcc 547
Query: 310 aagtatga 317
||||||||
Sbjct: 548 aagtatga 555
>gnl|LJGI|GO012202 homologue to UniRef100_A5AP73 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), complete
Length = 680
Score = 121 bits (61), Expect = 3e-27
Identities = 181/221 (81%)
Strand = Plus / Plus
Query: 79 ttccctccagattaccctttcaaaccacccaaggttgccttccgcacaaaggttttccac 138
|||||||| ||||| || |||||||| ||||||||||| ||| | || ||||| |||||
Sbjct: 245 ttccctcctgattatcccttcaaacctcccaaggttgcattcaggaccaaggtattccat 304
Query: 139 cccaacattagcaacaatggtagtatttgccttgacattctcaaagaccagtggagcccg 198
|||||||| | | |||||| | ||||||| | ||||| |||||||| || ||||||||
Sbjct: 305 cccaacatcaatagcaatggcaatatttgcttggacatactcaaagaacaatggagccct 364
Query: 199 gccctcacaatatccaagatcctcctttctatatgctctttgctgacagaccccaaccca 258
|| ||||| ||||||||| | || || |||||||| ||| |||| ||||| || || ||
Sbjct: 365 gctctcaccatatccaaggtgcttctctctatatgttctctgctaacagatccaaatcct 424
Query: 259 gaggatcctctggtgcctgagattgctcatatgtacaagac 299
|| || ||| |||||||||| ||||||||||||| ||||||
Sbjct: 425 gatgaccctttggtgcctgaaattgctcatatgtgcaagac 465
>gnl|LJGI|TC57702 UniRef100_Q8LJR9 Cluster: Ubiquitin carrier protein; n=2;
Papilionoideae|Rep: Ubiquitin carrier protein - Glycine
max (Soybean), complete
Length = 897
Score = 81.8 bits (41), Expect = 3e-15
Identities = 280/357 (78%), Gaps = 2/357 (0%)
Strand = Plus / Plus
Query: 1 atgttcaattggcaagctacaattatgggccctgcagatagcccatttgctggtggcgtg 60
|||||| | |||||||| ||||||||||| ||||| || || |||| |||||| || ||
Sbjct: 276 atgttccactggcaagcgacaattatgggtcctgctgacagtccatatgctggaggtgta 335
Query: 61 tttcttgcatcaattcgcttccctccagattaccctttcaaaccacccaaggttgccttc 120
||||||| | |||| |||||||| ||||| |||||||| || || |||||||| ||
Sbjct: 336 tttcttgttactattcatttccctcctgattatcctttcaagccccctaaggttgcattt 395
Query: 121 cgcacaaaggttttccaccccaacattagcaacaatggtagtatttgccttgacattctc 180
| || ||||| || ||||| ||||| | | ||| ||||| ||||| ||||| || ||
Sbjct: 396 aggactaaggtctttcacccgaacatcaatagcaacggtagcatttgtcttgatatcctg 455
Query: 181 aaagaccagtggagcccggccctcacaatatccaagatcctcctttctatatgctctttg 240
|| || |||||||| || || || || || || ||| | || ||||| || ||||| ||
Sbjct: 456 aaggaacagtggagtcctgcgcttaccatctcaaaggtactgctttcgatctgctcactg 515
Query: 241 ctgacagaccccaacccagaggatcctctggtgcctgagattgctcatatgtacaagact 300
||||| || || ||||| || || || || ||||| ||||||||||| |||||||| ||
Sbjct: 516 ctgactgatccaaaccctgatgacccgcttgtgccagagattgctcacatgtacaaaacc 575
Query: 301 gatagggccaagtatgagagcactgcacagctg-tggacccagaaatatgccatggg 356
|| |||||||||| ||| |||||| | || | |||||||||||||||||||||||
Sbjct: 576 gaccgggccaagtacgaggccactgctc-gcagctggacccagaaatatgccatggg 631
>gnl|LJGI|BW597528 similar to UniRef100_Q4VSV2 Cluster: Ubiquitin carrier protein;
n=1; Picea abies|Rep: Ubiquitin carrier protein - Picea
abies (Norway spruce) (Picea excelsa), partial (58%)
Length = 480
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 242 tgacagaccccaacccagaggatcctctggtgcctgagattgctcatatgtacaagactg 301
|||| ||||||||||| || |||||||| |||||||| ||||| || |||||||||||||
Sbjct: 188 tgacggaccccaaccccgatgatcctcttgtgcctgaaattgcgcacatgtacaagactg 247
Query: 302 atagggccaagtatga 317
| |||||||||||||
Sbjct: 248 accgggccaagtatga 263
>gnl|LJGI|GO024533 homologue to UniRef100_Q8LJR9 Cluster: Ubiquitin carrier protein;
n=2; Papilionoideae|Rep: Ubiquitin carrier protein -
Glycine max (Soybean), complete
Length = 548
Score = 73.8 bits (37), Expect = 6e-13
Identities = 279/357 (78%), Gaps = 2/357 (0%)
Strand = Plus / Plus
Query: 1 atgttcaattggcaagctacaattatgggccctgcagatagcccatttgctggtggcgtg 60
|||||| | |||||||| ||| ||||||| ||||| || || |||| |||||| || ||
Sbjct: 127 atgttccactggcaagcgacatttatgggtcctgctgacagtccatatgctggaggtgta 186
Query: 61 tttcttgcatcaattcgcttccctccagattaccctttcaaaccacccaaggttgccttc 120
||||||| | |||| |||||||| ||||| |||||||| || || |||||||| ||
Sbjct: 187 tttcttgttactattcatttccctcctgattatcctttcaagccccctaaggttgcattt 246
Query: 121 cgcacaaaggttttccaccccaacattagcaacaatggtagtatttgccttgacattctc 180
| || ||||| || ||||| ||||| | | ||| ||||| ||||| ||||| || ||
Sbjct: 247 aggactaaggtctttcacccgaacatcaatagcaacggtagcatttgtcttgatatcctg 306
Query: 181 aaagaccagtggagcccggccctcacaatatccaagatcctcctttctatatgctctttg 240
|| || |||||||| || || || || || || ||| | || ||||| || ||||| ||
Sbjct: 307 aaggaacagtggagtcctgcgcttaccatctcaaaggtactgctttcgatctgctcactg 366
Query: 241 ctgacagaccccaacccagaggatcctctggtgcctgagattgctcatatgtacaagact 300
||||| || || ||||| || || || || ||||| ||||||||||| |||||||| ||
Sbjct: 367 ctgactgatccaaaccctgatgacccgcttgtgccagagattgctcacatgtacaaaacc 426
Query: 301 gatagggccaagtatgagagcactgcacagctg-tggacccagaaatatgccatggg 356
|| |||||||||| ||| |||||| | || | |||||||||||||||||||||||
Sbjct: 427 gaccgggccaagtacgaggccactgctc-gcagctggacccagaaatatgccatggg 482
>gnl|LJGI|TC69688 UniRef100_A9SDW9 Cluster: Predicted protein; n=2; Embryophyta|Rep:
Predicted protein - Physcomitrella patens subsp. patens,
complete
Length = 1004
Score = 69.9 bits (35), Expect = 1e-11
Identities = 220/279 (78%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 79 ttccctccagattaccctttcaaaccacccaaggttgccttccgcacaaaggttttccac 138
|||||||| |||||||| ||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 443 ttccctccggattaccccttcaagccacccaaggttgcattccggaccaaggtatttcac 502
Query: 139 cccaacattagcaacaatggtagtatttgccttgacattctcaaagaccagtggagcccg 198
|| || || | | ||| || || |||||||||||||| | || || |||||||||||
Sbjct: 503 ccaaatatcaatagcaacggaagcatttgccttgacatattgaaggagcagtggagccct 562
Query: 199 gccctcacaatatccaagatcctcctttctatatgctctttgctgacagaccccaaccca 258
|| || || || |||||| | | || || || || || ||||| || ||||| |||||
Sbjct: 563 gcactaaccatttccaaggtgttgctctcaatttgttccttgctaacggacccaaaccct 622
Query: 259 gaggatcctctggtgcctgagattgctcatatgtacaagactgatagggccaagtatgag 318
|| ||||| |||| ||||| || || || ||||||||||| || ||| ||||||||||
Sbjct: 623 gatgatcccttggtccctgaaatcgcccacatgtacaagacagacaggaacaagtatgag 682
Query: 319 agcactgcacagctg-tggacccagaaatatgccatggg 356
||||| ||| | |||||||||||||||||||||||
Sbjct: 683 tcaactgc-caggagctggacccagaaatatgccatggg 720
>gnl|LJGI|TC62042 UniRef100_A9SDW9 Cluster: Predicted protein; n=2; Embryophyta|Rep:
Predicted protein - Physcomitrella patens subsp. patens,
complete
Length = 820
Score = 69.9 bits (35), Expect = 1e-11
Identities = 220/279 (78%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 79 ttccctccagattaccctttcaaaccacccaaggttgccttccgcacaaaggttttccac 138
|||||||| |||||||| ||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 295 ttccctccggattaccccttcaagccacccaaggttgcattccggaccaaggtatttcac 354
Query: 139 cccaacattagcaacaatggtagtatttgccttgacattctcaaagaccagtggagcccg 198
|| || || | | ||| || || |||||||||||||| | || || |||||||||||
Sbjct: 355 ccaaatatcaatagcaacggaagcatttgccttgacatattgaaggagcagtggagccct 414
Query: 199 gccctcacaatatccaagatcctcctttctatatgctctttgctgacagaccccaaccca 258
|| || || || |||||| | | || || || || || ||||| || ||||| |||||
Sbjct: 415 gcactaaccatttccaaggtgttgctctcaatttgttccttgctaacggacccaaaccct 474
Query: 259 gaggatcctctggtgcctgagattgctcatatgtacaagactgatagggccaagtatgag 318
|| ||||| |||| ||||| || || || ||||||||||| || ||| ||||||||||
Sbjct: 475 gatgatcccttggtccctgaaatcgcccacatgtacaagacagacaggaacaagtatgag 534
Query: 319 agcactgcacagctg-tggacccagaaatatgccatggg 356
||||| ||| | |||||||||||||||||||||||
Sbjct: 535 tcaactgc-caggagctggacccagaaatatgccatggg 572
>gnl|LJGI|TC75298 UniRef100_A9SDW9 Cluster: Predicted protein; n=2; Embryophyta|Rep:
Predicted protein - Physcomitrella patens subsp. patens,
partial (93%)
Length = 513
Score = 63.9 bits (32), Expect = 6e-10
Identities = 188/240 (78%)
Strand = Plus / Plus
Query: 79 ttccctccagattaccctttcaaaccacccaaggttgccttccgcacaaaggttttccac 138
|||||||| |||||||| ||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 266 ttccctccggattaccccttcaagccacccaaggttgcattccggaccaaggtatttcac 325
Query: 139 cccaacattagcaacaatggtagtatttgccttgacattctcaaagaccagtggagcccg 198
|| || || | | ||| || || |||||||||||||| | || || |||||||||||
Sbjct: 326 ccaaatatcaatagcaacggaagcatttgccttgacatattgaaggagcagtggagccct 385
Query: 199 gccctcacaatatccaagatcctcctttctatatgctctttgctgacagaccccaaccca 258
|| || || || |||||| | | || || || || || ||||| || ||||| |||||
Sbjct: 386 gcactaaccatttccaaggtgttgctctcaatttgttccttgctaacggacccaaaccct 445
Query: 259 gaggatcctctggtgcctgagattgctcatatgtacaagactgatagggccaagtatgag 318
|| ||||| |||| ||||| || || || ||||||||||| || ||| ||||||||||
Sbjct: 446 gatgatcccttggtccctgaaatcgcccacatgtacaagacagacaggaacaagtatgag 505
>gnl|LJGI|TC63659 UniRef100_Q06H23 Cluster: Ubiquitin carrier protein; n=2;
Papilionoideae|Rep: Ubiquitin carrier protein - Arachis
hypogaea (Peanut), partial (80%)
Length = 840
Score = 54.0 bits (27), Expect = 6e-07
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 271 gtgcctgagattgctcatatgtacaagactgatagggccaagtatgagagcactgcacag 330
||||| ||||||||||| |||||||| || || |||||||||| ||| |||||| | |
Sbjct: 442 gtgccagagattgctcacatgtacaaaaccgaccgggccaagtacgaggccactgctc-g 500
Query: 331 ctg-tggacccagaaatatgccatggg 356
| | |||||||||||||||||||||||
Sbjct: 501 cagctggacccagaaatatgccatggg 527
>gnl|LJGI|GO036563 homologue to UniRef100_A5BM41 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), partial (26%)
Length = 580
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 154 aatggtagtatttgccttgacattctcaaagaccagtggag 194
||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 397 aatggcagtatatgccttgacattcttaaagaacagtggag 437