Miyakogusa Predicted Gene

Lj3g3v1603830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1603830.1 CUFF.42832.1
         (756 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU252135 similar to UniRef100_A7Q0R4 Cluster: Chromosom...   541   e-153

>gnl|LJGI|AU252135 similar to UniRef100_A7Q0R4 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 350

 Score =  541 bits (273), Expect = e-153
 Identities = 280/283 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaataccttcttacaccttgttcctcttcttttcttcagccttatgctctccatcat 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  atgcaatacctccttacaccttgttcctcttcttttcttcagccttatgctctccatcat 127

                                                                       
Query: 61  caccctcatcttctccataaagttcgcagaccgggtctacttaagcctcactgttctcag 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 128 caccctcatcttctccataaagttcgcanaccgggtctacttaagcctcactgttctcag 187

                                                                       
Query: 121 ggacagcagagcctcagaactacttcatggagtcaggtgtcactttcactatttggcaca 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 188 ggacagcagagcctcagaactacttcatggantcaggtgtcactttcactatttggcaca 247

                                                                       
Query: 181 ggcttcttgtttggtccccttattgatggactccattccagagtcaatctggtggtgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggcttcttgtttggtccccttattgatggactccattccagagtcaatctggtggtgtac 307

                                                      
Query: 241 aagtcaggatcaattgacataggtccactccacacaaacatct 283
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aagtcaggatcaattgacataggtccactccacacaaacatct 350