Miyakogusa Predicted Gene
- Lj3g3v1545570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1545570.1 tr|B7FHX6|B7FHX6_MEDTR Transcription factor ILR3
OS=Medicago truncatula GN=MTR_2g082640 PE=2
SV=1,76.79,0,coiled-coil,NULL; no description,Helix-loop-helix domain;
helix loop helix domain,Helix-loop-helix d,CUFF.42791.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60959 similar to UniRef100_A7P102 Cluster: Chromosome... 1378 0.0
gnl|LJGI|TC65685 similar to UniRef100_A7P102 Cluster: Chromosome... 1227 0.0
gnl|LJGI|TC65205 similar to UniRef100_A7P102 Cluster: Chromosome... 329 1e-89
gnl|LJGI|TC67303 similar to UniRef100_A7P102 Cluster: Chromosome... 266 2e-70
gnl|LJGI|TC58249 similar to UniRef100_A7P102 Cluster: Chromosome... 78 8e-14
gnl|LJGI|TC79705 weakly similar to UniRef100_A7P102 Cluster: Chr... 70 2e-11
gnl|LJGI|BP060308 similar to UniRef100_A7P102 Cluster: Chromosom... 60 2e-08
>gnl|LJGI|TC60959 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 764
Score = 1378 bits (695), Expect = 0.0
Identities = 708/711 (99%), Gaps = 1/711 (0%)
Strand = Plus / Plus
Query: 1 atggtttccgcggaaaacaccaattggcttttcgattacggcttgatcgacgacgacatt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atggtttccccggaaaacaccaattggcttttcgattacggcttgatcgacgacgacatt 110
Query: 61 cccggctccgatggctccttcacgctctccgcttccgccttcaactggcctccaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cccggctccgatggctccttcacgctctccgcttccgccttcaactggcctccaccacca 170
Query: 121 cagccctccaatgtcggggttgaaattgatggctccctgggggattttgatgggctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cagccctccaatgtcggggttgaaattgatggctccctgggggattttgatgggctcaaa 230
Query: 181 gatcctggtgtgaagaagaggggtagaactgattcatgtgcaccttctagctctaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gatcctggtgtgaagaagaggggtagaactgattcatgtgcaccttctagctctaaagct 290
Query: 241 tgccgggagaagttgcggagggataaactgaatgacaagtttgtcgaattaggctccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgccgggagaagttgcggagggataaactgaatgacaagtttgtcgaattaggctccatc 350
Query: 301 ttggagcctggaaggcctcccaaaacagacaaggctgctattcttatagatgcagttcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttggagcctggaaggcctcccaaaacagacaaggctgctattcttatagatgcagttcga 410
Query: 361 gtggtgacgcagttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtggtgacgcagttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaa 470
Query: 421 gaaaagataaaagagttaaaggctgagaagaatgagcttcgtgatgagaaacagaggctt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 471 gaaaagataaaagagttaaaggctgagaagaatgagcttcttgatgagaaacagaggctt 530
Query: 481 aaagcagagaaagagaagttggagcagcaggtgaaattaatgaatgttcaacaacctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aaagcagagaaagagaagttggagcagcaggtgaaattaatgaatgttcaacaacctggt 590
Query: 541 ttcttgccagcccctcctacaattcctgctgcattttctgcacttggtcaagcccctggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttcttgccagcccctcctacaattcctgctgcattttctgcacttggtcaagcccctggc 650
Query: 601 agcaagtttgtgccttatggttaccatccaggagttgccatgtggcaatttttgccgtct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 agcaagtttgtgccttatggttaccatccaggagttgccatgtggcaatttttgccgtct 710
Query: 661 gctgccgtggatacctcacaggaccatcaactccgaccaccagctgcctaa 711
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 711 gctgccgtggatacctcaca-gaccatcaactccgaccaccagctgcctaa 760
>gnl|LJGI|TC65685 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 769
Score = 1227 bits (619), Expect = 0.0
Identities = 622/623 (99%)
Strand = Plus / Plus
Query: 1 atggtttccgcggaaaacaccaattggcttttcgattacggcttgatcgacgacgacatt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atggtttccccggaaaacaccaattggcttttcgattacggcttgatcgacgacgacatt 206
Query: 61 cccggctccgatggctccttcacgctctccgcttccgccttcaactggcctccaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cccggctccgatggctccttcacgctctccgcttccgccttcaactggcctccaccacca 266
Query: 121 cagccctccaatgtcggggttgaaattgatggctccctgggggattttgatgggctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cagccctccaatgtcggggttgaaattgatggctccctgggggattttgatgggctcaaa 326
Query: 181 gatcctggtgtgaagaagaggggtagaactgattcatgtgcaccttctagctctaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gatcctggtgtgaagaagaggggtagaactgattcatgtgcaccttctagctctaaagct 386
Query: 241 tgccgggagaagttgcggagggataaactgaatgacaagtttgtcgaattaggctccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgccgggagaagttgcggagggataaactgaatgacaagtttgtcgaattaggctccatc 446
Query: 301 ttggagcctggaaggcctcccaaaacagacaaggctgctattcttatagatgcagttcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttggagcctggaaggcctcccaaaacagacaaggctgctattcttatagatgcagttcga 506
Query: 361 gtggtgacgcagttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtggtgacgcagttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaa 566
Query: 421 gaaaagataaaagagttaaaggctgagaagaatgagcttcgtgatgagaaacagaggctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaaaagataaaagagttaaaggctgagaagaatgagcttcgtgatgagaaacagaggctt 626
Query: 481 aaagcagagaaagagaagttggagcagcaggtgaaattaatgaatgttcaacaacctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaagcagagaaagagaagttggagcagcaggtgaaattaatgaatgttcaacaacctggt 686
Query: 541 ttcttgccagcccctcctacaattcctgctgcattttctgcacttggtcaagcccctggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttcttgccagcccctcctacaattcctgctgcattttctgcacttggtcaagcccctggc 746
Query: 601 agcaagtttgtgccttatggtta 623
|||||||||||||||||||||||
Sbjct: 747 agcaagtttgtgccttatggtta 769
>gnl|LJGI|TC65205 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1065
Score = 329 bits (166), Expect = 1e-89
Identities = 458/552 (82%), Gaps = 5/552 (0%)
Strand = Plus / Plus
Query: 133 gtcggggttgaaattgatggctccctgggggattttgatgggctcaaagatcctggtgtg 192
||||| ||||| ||||||||||| | ||||||| ||| | |||||||| |||||| |
Sbjct: 267 gtcggtgttgagattgatggctcattaggggattctgacagtctcaaagagcctggttcg 326
Query: 193 aagaagaggggtagaactgattcatgtgcaccttctagctctaaagcttgccgggagaag 252
|||||||||| ||| |||| |||||| | || ||||||| ||||| ||||||||||||
Sbjct: 327 aagaagagggtcagatctgagtcatgttctgctactagctccaaagcatgccgggagaag 386
Query: 253 ttgcggagggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctgga 312
||||| | || ||||| |||||||||||||| ||| | |||||||| ||||||||||||
Sbjct: 387 ttgcgtcgagacaaacttaatgacaagtttgttgaactgggctccatattggagcctgga 446
Query: 313 aggcctcccaaaacagacaaggctgctattcttatagatgcagttcgagtggtgacgcag 372
|| |||||||||||||||||||||||||| || || ||||| || ||| ||||||| |||
Sbjct: 447 agacctcccaaaacagacaaggctgctatcctgattgatgctgtccgaatggtgactcag 506
Query: 373 ttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaagaaaagataaaa 432
|| | |||||||||||||| |||||||| | |||| |||||||||| ||||| |||
Sbjct: 507 ttaaggggtgaagcccagaagatgaaagacactaatatgggtcttcaagagaagattaaa 566
Query: 433 gagttaaaggctgagaagaatgagcttcgtgatgagaaacagaggcttaaagcagagaaa 492
||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 567 gagttaaagactgagaagaatgagcttcgtgatgagaagcagaggctcaagacagagaaa 626
Query: 493 gagaagttggagcagcaggtgaaattaatgaatgttcaacaacctggtttcttgccagcc 552
|||| ||||||||||||| |||||| ||||||| ||||||| ||||| |||| ||
Sbjct: 627 gagaggttggagcagcagctgaaatctatgaatg---cacaacctagtttcatgcccccc 683
Query: 553 cctcctacaattcctgctgcattttctgcacttggtcaagcccctggcagcaagtttgtg 612
|||| || | ||||||||||| |||||| || ||||||| ||||| |||||| |||
Sbjct: 684 cctcaagcactccctgctgcattcgctgcacaaggccaagcccatggcaacaagttagtg 743
Query: 613 ccttatggttaccatccaggagttgccatgtggcaatttttgccgtctgctgc-cgtgga 671
|| | | | ||||||||||||||||||||||||| ||||| ||||||| ||| ||
Sbjct: 744 ccatttatcagctatccaggagttgccatgtggcaattcttgcctcctgctgcgcgt-ga 802
Query: 672 tacctcacagga 683
||||||||||||
Sbjct: 803 tacctcacagga 814
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 atggtttccgcggaaaacaccaattggcttttcgattacggcttgatcgacga 53
||||||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 126 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacga 178
>gnl|LJGI|TC67303 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 721
Score = 266 bits (134), Expect = 2e-70
Identities = 331/394 (84%), Gaps = 2/394 (0%)
Strand = Plus / Plus
Query: 133 gtcggggttgaaattgatggctccctgggggattttgatgggctcaaagatcctggtgtg 192
||||| ||||| ||||||||||| | ||||||| ||| | |||||||| ||||| |
Sbjct: 330 gtcggtgttgagattgatggctcattaggggattctgacagtctcaaagagcctggctcg 389
Query: 193 aagaagaggggtagaactgattcatgtgcaccttctagctctaaagcttgccgggagaag 252
|||||||||| ||| |||| |||||| | || ||||||| ||||| ||||||||||||
Sbjct: 390 aagaagagggtcagatctgagtcatgttctgctactagctccaaagcatgccgggagaag 449
Query: 253 ttgcggagggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctgga 312
||||| | || ||||| |||||||||||||| ||| | |||||||| ||||||||||||
Sbjct: 450 ttgcgtcgagacaaacttaatgacaagtttgttgaactgggctccatattggagcctgga 509
Query: 313 aggcctcccaaaacagacaaggctgctattcttatagatgcagttcgagtggtgacgcag 372
|| |||||||||||||||||||||||||| || || ||||| || ||| ||||||| |||
Sbjct: 510 agacctcccaaaacagacaaggctgctatcctgattgatgctgtccgaatggtgactcag 569
Query: 373 ttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaagaaaagataaaa 432
|| | |||||||||||||| |||||||| | |||| |||||||||| ||||| |||
Sbjct: 570 ttaaggggtgaagcccagaagatgaaagacactaatatgggtcttcaagagaagattaaa 629
Query: 433 gagttaaaggctgagaagaatgagcttcgtgatgagaaacagaggcttaaagcagagaaa 492
||||||||| |||||||||||||||||||||||||||| |||| ||| || ||||||||
Sbjct: 630 gagttaaagactgagaagaatgagcttcgtgatgagaagcaga-gctcaagacagagaaa 688
Query: 493 gagaagttggagcagcaggtgaaattaatgaatg 526
||| || ||||||||||| |||||| |||||||
Sbjct: 689 gag-aggtggagcagcagctgaaatctatgaatg 721
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 atggtttccgcggaaaacaccaattggcttttcgattacggcttgatcgacga 53
||||||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 189 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacga 241
>gnl|LJGI|TC58249 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 863
Score = 77.8 bits (39), Expect = 8e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 259 agggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctggaaggcct 318
||||||||||||||||| | |||| | ||||| | || |||||||||||||| ||||
Sbjct: 266 agggataaactgaatgagaggtttctggaattgagttctatcttggagcctggtaggcag 325
Query: 319 cccaaaacagacaaggctgctat 341
|||||||||||||||||||||||
Sbjct: 326 cccaaaacagacaaggctgctat 348
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 418 caagaaaagataaaagagttaaaggctgagaagaatgagcttcgtgatgagaa 470
|||||||| || |||||||| |||||||||||||||||| |||||||||||||
Sbjct: 425 caagaaaaaattaaagagttgaaggctgagaagaatgagattcgtgatgagaa 477
>gnl|LJGI|TC79705 weakly similar to UniRef100_A7P102 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 648
Score = 69.9 bits (35), Expect = 2e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 259 agggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctggaaggcct 318
||||||||||||||||| | |||| | ||||| | || |||| ||||||||| ||||
Sbjct: 343 agggataaactgaatgagaggtttctggaattgagttctatctcggagcctggtaggcag 402
Query: 319 cccaaaacagacaaggctgctat 341
|||||||||||||||||||||||
Sbjct: 403 cccaaaacagacaaggctgctat 425
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 418 caagaaaagataaaagagttaaaggctgagaagaatgagcttcgtgatgagaa 470
|||||||| || |||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 502 caagaaaaaattaaagagttgaaggctgaggagaatgagattcgtgatgagaa 554
>gnl|LJGI|BP060308 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 354
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 626 atccaggagttgccatgtggcaatttttgccgtctgctgccgtggatacctcacagga 683
||||||||||| | |||||||||||||| || |||||||| || |||||||| |||||
Sbjct: 261 atccaggagtttcaatgtggcaatttttaccatctgctgctgttgatacctctcagga 204