Miyakogusa Predicted Gene

Lj3g3v1507280.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1507280.2 Non Chatacterized Hit- tr|I3SL79|I3SL79_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,89.34,0,Ribosomal protein L1,Ribosomal protein L1, superfamily;
Ribosomal_L1,Ribosomal protein L1; seg,NULL;,CUFF.42713.2
         (834 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76839 similar to UniRef100_A7PJI6 Cluster: Chromosome...  1618   0.0  

>gnl|LJGI|TC76839 similar to UniRef100_A7PJI6 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (52%)
          Length = 1487

 Score = 1618 bits (816), Expect = 0.0
 Identities = 819/820 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggagatggagaggaggaggattgaggcggaggatcagttgagggcgagaatggtcaga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431  atggagatggagaggaggaggattgaggcggaggatcagttgagggcgagaatggtcaga 490

                                                                        
Query: 61   gctgtggaagatgaaaagatgaaggttccttttccgttgttgattaggcctaagcagaag 120
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 491  gctgtggaagatgaaaagatgaaggttccttttccgttattgattaggcctaagcagaag 550

                                                                        
Query: 121  gagaagccccctgttcttgatttgatggaggccattcgccaagttaaggccaatgccaag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551  gagaagccccctgttcttgatttgatggaggccattcgccaagttaaggccaatgccaag 610

                                                                        
Query: 181  gcgaagtttgatgaaactattgaagcacatataagattgggtattgagtcaaagcgaacc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611  gcgaagtttgatgaaactattgaagcacatataagattgggtattgagtcaaagcgaacc 670

                                                                        
Query: 241  gaactggcagttcgtggtactgtgattctgcctcatggtgctcctaaggccgtcagtgtg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671  gaactggcagttcgtggtactgtgattctgcctcatggtgctcctaaggccgtcagtgtg 730

                                                                        
Query: 301  gctgtttttgcagaaggggcagaagcagaagaagctagagctgcaggagctgatatagtt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731  gctgtttttgcagaaggggcagaagcagaagaagctagagctgcaggagctgatatagtt 790

                                                                        
Query: 361  ggtggcaaagagcttattgaggagattgccagtggtaataataagctcaaagttgacaag 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  ggtggcaaagagcttattgaggagattgccagtggtaataataagctcaaagttgacaag 850

                                                                        
Query: 421  tgtttttcaactcctggaatggcacctcatcttggaaagatagcacagtatctaagaaag 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  tgtttttcaactcctggaatggcacctcatcttggaaagatagcacagtatctaagaaag 910

                                                                        
Query: 481  cgcagattgatgccagacaagaaactaggtactctgaccaatgatatttctgggcagttg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911  cgcagattgatgccagacaagaaactaggtactctgaccaatgatatttctgggcagttg 970

                                                                        
Query: 541  aaagagctaagacagggtcgtcttgagtttaaaatggaaagtaaatcaattttgcatgcc 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  aaagagctaagacagggtcgtcttgagtttaaaatggaaagtaaatcaattttgcatgcc 1030

                                                                        
Query: 601  ggagttggaaaggtaagctacaaagatgagtctttacgagagaatattggtgcatttatg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ggagttggaaaggtaagctacaaagatgagtctttacgagagaatattggtgcatttatg 1090

                                                                        
Query: 661  aatgctgtgctccttgcaaagcctgctggcttaaagaagacttccaaatatgctgggtat 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 aatgctgtgctccttgcaaagcctgctggcttaaagaagacttccaaatatgctgggtat 1150

                                                                        
Query: 721  gtgctgtctgtccatatatgcagcacgatgggcccaggatttcctgtatcaatacagtcg 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 gtgctgtctgtccatatatgcagcacgatgggcccaggatttcctgtatcaatacagtcg 1210

                                                    
Query: 781  ttatcgaaagcagcagataactacaagaaaatgcatgtgg 820
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 ttatcgaaagcagcagataactacaagaaaatgcatgtgg 1250