Miyakogusa Predicted Gene

Lj3g3v0718500.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0718500.1 Non Chatacterized Hit- tr|B8LKC1|B8LKC1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,43.24,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_34548_length_728_cov_358.888733.path1.1
         (364 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74408 weakly similar to UniRef100_A7R5P9 Cluster: Chr...   722   0.0  

>gnl|LJGI|TC74408 weakly similar to UniRef100_A7R5P9 Cluster: Chromosome undetermined
           scaffold_1021, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_1021,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (44%)
          Length = 615

 Score =  722 bits (364), Expect = 0.0
 Identities = 364/364 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgtaatggattgaaagataccatctttggccgcttgagcaatatgccatcttccgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  atgtgtaatggattgaaagataccatctttggccgcttgagcaatatgccatcttccgta 116

                                                                       
Query: 61  gggaaagggttgatcaggcaagaagaggaacttgaagacttaaaatgttatgttatgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gggaaagggttgatcaggcaagaagaggaacttgaagacttaaaatgttatgttatgagc 176

                                                                       
Query: 121 tttcatcctgggtcattgcagagatgtgccaggttgagatctaaggaggctgtgaatttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tttcatcctgggtcattgcagagatgtgccaggttgagatctaaggaggctgtgaatttg 236

                                                                       
Query: 181 attgagagttatagttttgccctttttaaccatgagggttctggttcagttgagaaggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 attgagagttatagttttgccctttttaaccatgagggttctggttcagttgagaaggat 296

                                                                       
Query: 241 gatgagattttgacttcattttctagcctcaagaggctagtcttggaagctgttgctttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gatgagattttgacttcattttctagcctcaagaggctagtcttggaagctgttgctttt 356

                                                                       
Query: 301 ggatctttcctgtgggagacagaagattacattgacatgttatataagcttaaggataat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggatctttcctgtgggagacagaagattacattgacatgttatataagcttaaggataat 416

               
Query: 361 taag 364
           ||||
Sbjct: 417 taag 420