Miyakogusa Predicted Gene
- Lj3g3v0642450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0642450.1 Non Chatacterized Hit- tr|I1MVR5|I1MVR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,24.59,4e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; PGR3 (PROTON
GRADIENT REGULATION 3),N,gene.g45759.t1.1
(1779 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336830 weakly similar to UniRef100_A7Q9C2 Cluster: Ch... 1475 0.0
gnl|LJGI|BW627355 similar to UniRef100_A7Q9C2 Cluster: Chromosom... 500 e-140
gnl|LJGI|TC60456 74 3e-12
>gnl|LJGI|FS336830 weakly similar to UniRef100_A7Q9C2 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 755
Score = 1475 bits (744), Expect = 0.0
Identities = 750/752 (99%)
Strand = Plus / Plus
Query: 63 cacttcacaaaatcatcatctcaaacaagcccgcgccctcctcatcaaaaccaacgcccc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cacttcacaaaatcatcatctcaaacaagcccgcgccctcctcatcaaaaccaacgcccc 63
Query: 123 tctctcccacgtcgacctcgcccatgtccccgcaatcgttccctggaactcatgcctcaa 182
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 64 tctctcccacgtcgacctcgcccatgtccccgcaattgttccctggaactcatgcctcaa 123
Query: 183 attcttcgccgaacgcggcgcgccatgcgacacaatctccctcttcctccgcttgcgcca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 attcttcgccgaacgcggcgcgccatgcgacacaatctccctcttcctccgcttgcgcca 183
Query: 243 gctgagcatcctcccagaccatttcacctgctctttcctcctcaaggcctgcaccatctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gctgagcatcctcccagaccatttcacctgctctttcctcctcaaggcctgcaccatctc 243
Query: 303 atctgacattgtcaccggaagaatcatccatgcgtacgtccagaagctcgggtttcagtc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atctgacattgtcaccggaagaatcatccatgcgtacgtccagaagctcgggtttcagtc 303
Query: 363 caacttgatcttgcagaacatgcttcttcacttgtatgcgtcctgtggggaaacaagcca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caacttgatcttgcagaacatgcttcttcacttgtatgcgtcctgtggggaaacaagcca 363
Query: 423 cgcccgcctcatgtttgataaaatgccgcaacaggatgttgccacttggaacataatgat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgcccgcctcatgtttgataaaatgccgcaacaggatgttgccacttggaacataatgat 423
Query: 483 cggccatttgattagcgcgggtgacgtgggcgctgcccgtgacttgtttgattccatgcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cggccatttgattagcgcgggtgacgtgggcgctgcccgtgacttgtttgattccatgcc 483
Query: 543 tcgaaggaacgtgaggtcgtggacttcggtcatttctgggcttgccaagtgtgggatgtc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcgaaggaacgtgaggtcgtggacttcggtcatttctgggcttgccaagtgtgggatgtc 543
Query: 603 tgaggaagctctaagggtgttctcggagatggaaagagaaggttcgaggcctaatgaggt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgaggaagctctaagggtgttctcggagatggaaagagaaggttcgaggcctaatgaggt 603
Query: 663 gaccgtggtggctgttctcgtggcttgtgctcagttgggggacttggagtttggcaagag 722
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 604 gaccgtggtggctgttctcgtggcttgtgctcagttgggggacttggagtttgtcaagag 663
Query: 723 cattcatcgcttcgctgaaggaaatgggtttctgcggaatgtttatgtttgcaatgcttt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cattcatcgcttcgctgaaggaaatgggtttctgcggaatgtttatgtttgcaatgcttt 723
Query: 783 gattgatatgtatgtcaagtgcgggtgcttgg 814
||||||||||||||||||||||||||||||||
Sbjct: 724 gattgatatgtatgtcaagtgcgggtgcttgg 755
>gnl|LJGI|BW627355 similar to UniRef100_A7Q9C2 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 488
Score = 500 bits (252), Expect = e-140
Identities = 412/463 (88%), Gaps = 13/463 (2%)
Strand = Plus / Plus
Query: 1 atgctttgcctttgctccacgctcccacctcaaat------acccaaacccacacacctc 54
|||||||||||||||| |||||||||||||||||| |||||| ||||||||||||
Sbjct: 27 atgctttgcctttgctgcacgctcccacctcaaattgttatacccaatcccacacacctc 86
Query: 55 gacc---acgccacttcacaaaatcatc---atctcaaacaagcccgcgccctcctcatc 108
|| | |||||||||||||| || | | ||||||||||||| |||||||||||||
Sbjct: 87 accccacatgccacttcacaaaaccaacccgagctcaaacaagcccacgccctcctcatc 146
Query: 109 aaaaccaacgcccctctctcccacgtcgacctcgcccatgtccccgcaatcgttccctgg 168
||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 147 aaaaccaacgctcctctctcgcacatcgacctcgcccaagtccccgaaatcgttccctg- 205
Query: 169 aactcatgcctcaaattcttcgccgaacgcggcgcgccatgcgacacaatctccctcttc 228
||||| ||||||||||||||| | ||||||||| | ||| || ||||||||||||||
Sbjct: 206 aactcctgcctcaaattcttcacggaacgcggcaccccacatgatgcaatctccctcttc 265
Query: 229 ctccgcttgcgccagctgagcatcctcccagaccatttcacctgctctttcctcctcaag 288
|| |||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 266 cttcgcttgggccaactgggcatcctcccagaccacttcacctgctctttcctcctcaag 325
Query: 289 gcctgcaccatctcatctgacattgtcaccggaagaatcatccatgcgtacgtccagaag 348
||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 326 gcctgcaccctctcatccgacatcgtcaccggaagaatcatccatgcgtacgtcgagaag 385
Query: 349 ctcgggtttcagtccaacttgatcttgcagaacatgcttcttcacttgtatgcgtcctgt 408
|||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 386 ctcgggtttcagaccaacttgatcttgcagaacatgcttcttcacttgtacgcatcctgt 445
Query: 409 ggggaaacaagccacgcccgcctcatgtttgataaaatgccgc 451
||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 446 ggggaaacaaggcacgcccgcctcatgttcgataaaatgccgc 488
>gnl|LJGI|TC60456
Length = 774
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 16 tccacgctcccacctcaaatacccaaacccacacacctcgaccacgcca 64
||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 586 tccacgctcccacctcacatacccaatcccacacacctcgatcacgcca 538