Miyakogusa Predicted Gene
- Lj3g3v0592200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0592200.1 Non Chatacterized Hit- tr|I1LXN6|I1LXN6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.48,0,trpS:
tryptophan--tRNA ligase,Tryptophan-tRNA ligase; seg,NULL; no
description,Rossmann-like alpha/b,CUFF.41015.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58170 similar to UniRef100_A7PJ67 Cluster: Chromosome... 831 0.0
gnl|LJGI|TC70904 similar to UniRef100_A7PJ67 Cluster: Chromosome... 678 0.0
gnl|LJGI|TC82059 similar to UniRef100_A7PJ67 Cluster: Chromosome... 161 1e-38
>gnl|LJGI|TC58170 similar to UniRef100_A7PJ67 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 818
Score = 831 bits (419), Expect = 0.0
Identities = 419/419 (100%)
Strand = Plus / Plus
Query: 47 tgattccattcatgttcaccaagtatttgcaagatacctttaaggttcctctggttatac 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgattccattcatgttcaccaagtatttgcaagatacctttaaggttcctctggttatac 459
Query: 107 agctcactgatgatgagaagttcttgtggaaaaatcttactatcgaggagagccaaagac 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agctcactgatgatgagaagttcttgtggaaaaatcttactatcgaggagagccaaagac 519
Query: 167 ttgcacgggagaacgcaaaggacatcattgcttgtggttttgacatttcaaagacattta 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttgcacgggagaacgcaaaggacatcattgcttgtggttttgacatttcaaagacattta 579
Query: 227 tcttctctgatttcagttatgtcggtagtgccttctacaagaacatgatggagattgcaa 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tcttctctgatttcagttatgtcggtagtgccttctacaagaacatgatggagattgcaa 639
Query: 287 agcgtgtgacttataaccaggctgttggtatttttggtttcactggggaagatcatattg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agcgtgtgacttataaccaggctgttggtatttttggtttcactggggaagatcatattg 699
Query: 347 gaaaagttagttttccacctgtgcaggcagctccatcatttccgagttcatttcctcacc 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaaaagttagttttccacctgtgcaggcagctccatcatttccgagttcatttcctcacc 759
Query: 407 tattttctggcaaagaaaaactccgttgtttgattccttgtgcaattgaccaggatcct 465
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tattttctggcaaagaaaaactccgttgtttgattccttgtgcaattgaccaggatcct 818
Score = 89.7 bits (45), Expect = 3e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1 atgaaaagggtgataggttttacttgtataccggtcgaggaccgt 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atgaaaagggtgataggttttacttgtataccggtcgaggaccgt 372
>gnl|LJGI|TC70904 similar to UniRef100_A7PJ67 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 624
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 598 tatgttactgattctgcaaaagatataaagaataaggtaaacaagtatgcgttctccggt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgttactgattctgcaaaagatataaagaataaggtaaacaagtatgcgttctccggt 60
Query: 658 gggcaagattctatagaaaaacataggcaattaggggcaaatcttgaggtagatatacca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggcaagattctatagaaaaacataggcaattaggggcaaatcttgaggtagatatacca 120
Query: 718 atcaaatacctttcctttttcctagaagatgatgatgaacttgaacacataaagaaggag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaaatacctttcctttttcctagaagatgatgatgaacttgaacacataaagaaggag 180
Query: 778 tatggagcagggcgcatgctcactggtgaggtgaagcagcgcctagtcgaagttttgact 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatggagcagggcgcatgctcactggtgaggtgaagcagcgcctagtcgaagttttgact 240
Query: 838 gcactagtggaaagacattgtagggctcgggctgctgtgactgaagagatggtggatgca 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcactagtggaaagacattgtagggctcgggctgctgtgactgaagagatggtggatgca 300
Query: 898 tttatggctgtcagaccacttccccacatgtttgactgaaga 939
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttatggctgtcagaccacttccccacatgtttgactgaaga 342
>gnl|LJGI|TC82059 similar to UniRef100_A7PJ67 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 620
Score = 161 bits (81), Expect = 1e-38
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 371 aggcagctccatcatttccgagttcatttcctcacctattttctggcaaagaaaaactcc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aggcagctccatcatttccgagttcatttcctcacctattttctggcaaagaaaaactcc 482
Query: 431 gttgtttgattccttgtgcaattga 455
||||||||||||||||||||||||
Sbjct: 483 attgtttgattccttgtgcaattga 507