Miyakogusa Predicted Gene

Lj3g3v0478180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0478180.1 Non Chatacterized Hit- tr|D8RPH8|D8RPH8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.67,0.000000000003,seg,NULL,
NODE_46239_length_995_cov_86.626129.path1.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78322 weakly similar to UniRef100_A7QWV1 Cluster: Chr...   680   0.0  
gnl|LJGI|TC79127 similar to UniRef100_A6F347 Cluster: GGDEF doma...   317   4e-86
gnl|LJGI|BP031248 weakly similar to UniRef100_A7QWV1 Cluster: Ch...   161   6e-39

>gnl|LJGI|TC78322 weakly similar to UniRef100_A7QWV1 Cluster: Chromosome chr13
           scaffold_210, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_210, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (31%)
          Length = 478

 Score =  680 bits (343), Expect = 0.0
 Identities = 346/347 (99%)
 Strand = Plus / Plus

                                                                       
Query: 233 agaatgtgtatggtttgagcagagttgtggcggttctgggtctggttcagcttggtcttg 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agaatgtgtatggtttgagcagagttgtggcggttctgggtctggttcagcttggtcttg 60

                                                                       
Query: 293 gagcttggatcacctacgtgacgagatcttccccgatcactgaggtttcggtgcagagtt 352
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61  gagcttggatcacctacgtgacgagatcttccccgatccctgaggtttcggtgcagagtt 120

                                                                       
Query: 353 ttgtggcgtttgcgttgccgttttctctggcgtttatgcttcgccagtgtttgaagccga 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtggcgtttgcgttgccgttttctctggcgtttatgcttcgccagtgtttgaagccga 180

                                                                       
Query: 413 tgcatttcttgaagaagatggaggagcaaggtaggttgcagattctgacgctgactatgc 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcatttcttgaagaagatggaggagcaaggtaggttgcagattctgacgctgactatgc 240

                                                                       
Query: 473 aagttgcgaagcagttgaatgctttctttgtgagggttcgtggggtttcgtttctttgca 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagttgcgaagcagttgaatgctttctttgtgagggttcgtggggtttcgtttctttgca 300

                                                          
Query: 533 ttgttggtatgtctgctgggttggtttttgctgtgttttcaagatga 579
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgttggtatgtctgctgggttggtttttgctgtgttttcaagatga 347


>gnl|LJGI|TC79127 similar to UniRef100_A6F347 Cluster: GGDEF domain-like protein;
           n=1; Marinobacter algicola DG893|Rep: GGDEF domain-like
           protein - Marinobacter algicola DG893, partial (3%)
          Length = 477

 Score =  317 bits (160), Expect = 4e-86
 Identities = 160/160 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacccttttgttccagtagcaaaacccaggtttttctcaaccccaaatccatcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgaacccttttgttccagtagcaaaacccaggtttttctcaaccccaaatccatcatca 377

                                                                       
Query: 61  tcatcagactcatcttcagaatctgagaatacccagaagccaaatcaaaccgaaaatcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcatcagactcatcttcagaatctgagaatacccagaagccaaatcaaaccgaaaatcca 437

                                                   
Query: 121 tacccgagtcaaaacccgcatttcaagcaccaggagatcg 160
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tacccgagtcaaaacccgcatttcaagcaccaggagatcg 477


>gnl|LJGI|BP031248 weakly similar to UniRef100_A7QWV1 Cluster: Chromosome chr13
           scaffold_210, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_210, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (6%)
          Length = 305

 Score =  161 bits (81), Expect = 6e-39
 Identities = 90/93 (96%)
 Strand = Plus / Minus

                                                                       
Query: 487 ttgaatgctttctttgtgagggttcgtggggtttcgtttctttgcattgttggtatgtct 546
           |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 305 ttgaatgctttctttgtgagggttcgtgggttttcgtttcttcgcattgttggtatgtct 246

                                            
Query: 547 gctgggttggtttttgctgtgttttcaagatga 579
           ||||||||||||||| |||||||||||||||||
Sbjct: 245 gctgggttggttttttctgtgttttcaagatga 213