Miyakogusa Predicted Gene
- Lj3g3v0115990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0115990.1 Non Chatacterized Hit- tr|I1M5Q9|I1M5Q9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55358
PE,85.48,0,DUF642,Protein of unknown function DUF642; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.40297.1
(1119 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV769644 similar to UniRef100_Q43557 Cluster: Unidentif... 472 e-132
gnl|LJGI|GO028016 similar to UniRef100_A7P7Q2 Cluster: Chromosom... 347 9e-95
gnl|LJGI|TC82481 homologue to UniRef100_A7P7Q2 Cluster: Chromoso... 218 6e-56
gnl|LJGI|TC80257 similar to UniRef100_A7P5N4 Cluster: Chromosome... 66 5e-10
>gnl|LJGI|AV769644 similar to UniRef100_Q43557 Cluster: Unidentified precursor; n=1;
Medicago sativa|Rep: Unidentified precursor - Medicago
sativa (Alfalfa), partial (9%)
Length = 416
Score = 472 bits (238), Expect = e-132
Identities = 334/352 (94%), Gaps = 12/352 (3%)
Strand = Plus / Plus
Query: 29 tgttcatctcagcatgtcacactgctttgtccttcatagatggtccattgccaaatg-gt 87
||||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 70 tgttcatctca-catgtcacactgctttgtccttcatagaggtcncattgccaaatgngt 128
Query: 88 ggcttcgagaaagggccaaaaccagtccaattgaaagggtcagtggtgaccgggaaggat 147
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 129 ggct-cgagaaagggccaaaaccag-ccaattgaaagggtcagtggtgaccgggaaggat 186
Query: 148 gcaattccggattggacaacttcagggttcgtcgaatacataaagtcagggcaacaacaa 207
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 gcaattccggattggacaacttcagggttcgtcgaat-cataaagtcagggcaacaacaa 245
Query: 208 ggcgacatgttgctagtggtgcccgagggcaaatacgcggttagacttggcaacgaagct 267
||||||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||
Sbjct: 246 ggcgacatgttgcta--ggggcccga-ggcaaatac-cgg-tagacttggcaacgaagct 300
Query: 268 tccattaagcagaaggtgaagttggctaaggggttgttctactcgatcacgttcagcgcg 327
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 tccattaagcagaaggtgaagttggctaaggggttgttctactcgatcac-ttcagcgcg 359
Query: 328 gcccgcacatgcgcgcaggaggagaagctgaacgtgtcggtggtgccaacca 379
||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcccg-acatgcgctcaggaggagaagctgaacgtgtcggtggtgccaacca 410
>gnl|LJGI|GO028016 similar to UniRef100_A7P7Q2 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (96%)
Length = 870
Score = 347 bits (175), Expect = 9e-95
Identities = 542/663 (81%), Gaps = 1/663 (0%)
Strand = Plus / Minus
Query: 418 atgtatggtagcaatggttgggaatcatttgcttgtgggtttagagcagattatccagaa 477
||||||||||||||||||||||| || | |||||||||||| | ||||||||| || |||
Sbjct: 857 atgtatggtagcaatggttgggactcttatgcttgtgggttcaaagcagatta-cctgaa 799
Query: 478 ggagaaattgtgatccataaccctggtgttgaagaggatccagcttgtggcccacttatt 537
||||||||||||||||||||||| | || ||||||||||||||||| |||||||||
Sbjct: 798 ttggaaattgtgatccataaccctggcatggaggaggatccagcttgtggtccacttatt 739
Query: 538 gattctgttgccttgaaggttttgaacccacccagaagaaccagagacaatttgcttaaa 597
|||||||||||||||||| ||||||||| || ||| |||||||||| |||||||| |||
Sbjct: 738 gattctgttgccttgaagactttgaaccctcctagacgaaccagagataatttgctgaaa 679
Query: 598 aatgggaactttgaagaaggtccttatatgtctcctcgtgagtcttggggggttttgatc 657
||||| ||||||||||||||||| || |||| || || ||||| ||| |||||
Sbjct: 678 aatggaaactttgaagaaggtccatacatgttcccaaacacatcatggggtgttctgatc 619
Query: 658 ccaccccacgctgaggacagtcatggtcctttaccaggatggatagttgagtctctgaag 717
||||||||| ||| ||| || |||| |||| |||||||| || |||||||| |||
Sbjct: 618 ccaccccacattgaagacgcccacagtcccctacctggatggatggtggagtctctcaag 559
Query: 718 gctgtgaagtatgttgattctgaccactttgctgtgcctgagggaaaaagagcaattgag 777
|| || || || | ||||| ||||||| || ||||| | ||||||||||| |||||
Sbjct: 558 gccgtaaaatacatcgattccaaccacttcgcggtgccggccggaaaaagagccgttgag 499
Query: 778 cttgttgcaggaaaagaaagtgctattgcacaagttgtgatcacttacattggcaaggtt 837
|| || || || || || |||| || |||||| ||| | || |||||||||||||
Sbjct: 498 ctcgtcgccgggaaggagagtgtcatagcacaaaatgtcaaaacaaccattggcaaggtt 439
Query: 838 tatgacctcacattctctgttggtgatgccaacaatgcatgtgaaggttccatggtggta 897
|| | |||||| || | || ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 438 tacgtcctcacttttgccgtcggtgacgccaacaattcatgtgaaggttccatggtggtt 379
Query: 898 gaagcatttgctggtcaagacactgtccaagttccttatcaatctaagggcaaaggaggg 957
|||||||||||||| ||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 378 gaagcatttgctggcggagacactgtccaagtcccatatcaatctaagggtaaaggaggg 319
Query: 958 tctgttacagggaaactaaggtttaaggctgtgacagaacgaactcgcatcaggttccta 1017
| |||| |||||| || |||| ||||||||| ||| ||| || || | |||||| |
Sbjct: 318 tttgttcgagggaagcttcggttcaaggctgtgtcagcacgcacccgtgtgaggttcttg 259
Query: 1018 agcacattttacaccatgaagaatgataactctggttctctttgtggacctgttattgat 1077
||||| || |||||||||||||||||||| |||||||| |||||||||||| | ||||||
Sbjct: 258 agcacgttctacaccatgaagaatgataattctggttcactttgtggacctataattgat 199
Query: 1078 gat 1080
|||
Sbjct: 198 gat 196
>gnl|LJGI|TC82481 homologue to UniRef100_A7P7Q2 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 394
Score = 218 bits (110), Expect = 6e-56
Identities = 110/110 (100%)
Strand = Plus / Minus
Query: 1008 caggttcctaagcacattttacaccatgaagaatgataactctggttctctttgtggacc 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 caggttcctaagcacattttacaccatgaagaatgataactctggttctctttgtggacc 335
Query: 1068 tgttattgatgatgtcaaattgctcagtgttcgctatcctaacaaacacc 1117
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgttattgatgatgtcaaattgctcagtgttcgctatcctaacaaacacc 285
>gnl|LJGI|TC80257 similar to UniRef100_A7P5N4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 372
Score = 65.9 bits (33), Expect = 5e-10
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 158 attggacaacttcagggttcgtcgaatacataaagtcagggcaacaacaaggcgacatgt 217
|||||||||| |||| || || || |||||||| |||||||| |||| || ||||||
Sbjct: 189 attggacaaccacaggctttgttgagtacataaaatcagggcagaaacagggtgacatgc 248
Query: 218 tgctagtggtgcccgagggcaaatacgcggttagacttggcaacgaagcttccattaagc 277
|||| | ||||||||||| | || || ||||| |||||||| ||||||||||| ||||
Sbjct: 249 tgctgattgtgcccgaggggacctatgctgttaggcttggcaatgaagcttccatcaagc 308
Query: 278 agaag 282
|||||
Sbjct: 309 agaag 313