Miyakogusa Predicted Gene
- Lj2g3v3281260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3281260.1 tr|G7K4N2|G7K4N2_MEDTR Pectinesterase OS=Medicago
truncatula GN=MTR_5g095490 PE=3 SV=1,86.03,0,no description,Pectin
lyase fold; Pectinesterase,Pectinesterase, catalytic; Pectin
lyase-like,Pectin,CUFF.39947.1
(420 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO015023 weakly similar to UniRef100_A9STS3 Cluster: Pr... 287 3e-77
gnl|LJGI|TC73648 weakly similar to UniRef100_A9STS3 Cluster: Pre... 56 2e-07
>gnl|LJGI|GO015023 weakly similar to UniRef100_A9STS3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(41%)
Length = 880
Score = 287 bits (145), Expect = 3e-77
Identities = 345/411 (83%), Gaps = 3/411 (0%)
Strand = Plus / Minus
Query: 1 atgcaagcagtggcactgagggtggacagcaacagggccatgttttataaagttaggata 60
||||||||||||||||| || || ||||| | || |||||||| ||| ||||| |||
Sbjct: 704 atgcaagcagtggcactaagagtagacagtgatagagccatgttctatggagttaagatt 645
Query: 61 aagggaacacaggacacactcttagacaacacaggaacacattacttctacaagtgtaga 120
||||||||||||||||| || |||||||||||| |||| |||||||||||| |||||
Sbjct: 644 aagggaacacaggacactcttttagacaacacatgaacccattacttctaccagtgtctc 585
Query: 121 atcgttggagaagttgattttatctttggcaatgcaaagtcactctatgagaaatgtcgc 180
||| || |||||||||| |||||||| | |||||| ||||| |||||||| |||||
Sbjct: 584 atccaaggcaaagttgatttcatctttggtagtgcaaaatcactatatgagaattgtcgt 525
Query: 181 cttgagtcaatagctaagaactatggagcaattgcagcacatcacagggattcaccacat 240
|||||||||||||| ||||||| ||||| ||| |||| |||||||||||||||||||||
Sbjct: 524 attgagtcaatagctgagaactacggagccatttcagcgcatcacagggattcaccacat 465
Query: 241 gaagatacaggtttttcttttgtaggatgcaatatcagaggaa---gtggaagtgtgtac 297
|| |||||| | |||||||||||||| || | || |||||| |||| | |||||||
Sbjct: 464 gaggatacaagcttttcttttgtagggtgtagcattggaggaagtggtggcaatgtgtac 405
Query: 298 cttggaagggcatggggggactactcaagaataatatactcacattgtaaaatggatgat 357
|||| || ||||||||||| ||||||||||||||||||||| |||| || |||||| ||
Sbjct: 404 cttgagagagcatggggggaatactcaagaataatatactcaaattgcaacatggataat 345
Query: 358 attatcaatcctgaaggatggtcagaatgggatcatccagaaagaaagaag 408
||||| |||||| ||||||| || |||||| ||||||| ||||||||||||
Sbjct: 344 attattaatcctcaaggatgatctgaatggaatcatcctgaaagaaagaag 294
>gnl|LJGI|TC73648 weakly similar to UniRef100_A9STS3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(44%)
Length = 1569
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 208 gcaattgcagcacatcacagggattcaccacatgaagatacaggtttttcttttgt 263
||||||||||| ||||||||||| ||||| ||||||| ||||| ||||| |||||
Sbjct: 1002 gcaattgcagctcatcacagggaatcacctgatgaagacacaggattttcatttgt 1057