Miyakogusa Predicted Gene
- Lj2g3v3224280.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3224280.2 Non Chatacterized Hit- tr|I0Z2I3|I0Z2I3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,29.48,2e-17,DNMT1-RFD,DNA (cytosine-5)-methyltransferase 1,
replication foci domain; FYVE/PHD zinc finger,Zinc f,CUFF.39900.2
(1398 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64026 weakly similar to UniRef100_A7P0H2 Cluster: Chr... 1053 0.0
gnl|LJGI|TC66233 103 3e-21
gnl|LJGI|TC70618 100 5e-20
gnl|LJGI|AV779915 weakly similar to UniRef100_A7P0H2 Cluster: Ch... 54 2e-06
>gnl|LJGI|TC64026 weakly similar to UniRef100_A7P0H2 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 790
Score = 1053 bits (531), Expect = 0.0
Identities = 534/535 (99%)
Strand = Plus / Plus
Query: 1 atgaagaggccaacggcggcaggttctgatgatgaggctgaggctgaagctgagatcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atgaagaggccaacggcggcaggttctgatgatgaggctgaggctgaagctgagatcgtt 315
Query: 61 attgtgtcgaattaccatcttgaagatgatgatgaggtgcccgtgtgtttttcggtgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 attgtgtcgaattaccatcttgaagatgatgatgaggtgcccgtgtgtttttcggtgttg 375
Query: 121 ccggttcaatggggtggtggtgattctgagagatcaattgatgcctgcaaagaggaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccggttcaatggggtggtggtgattctgagagatcaattgatgcctgcaaagaggaggtg 435
Query: 181 ttcttgcatggttctactgataatgggctgcagaaggtttttatgcaggttactgcatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttcttgcatggttctactgataatgggctgcagaaggtttttatgcaggttactgcatgg 495
Query: 241 aggtttgatctttccccggtgaaacctgaggtgtctctgctgtcaaaggatggaaagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aggtttgatctttccccggtgaaacctgaggtgtctctgctgtcaaaggatggaaagtgg 555
Query: 301 gtcaagcttgataagccaagaaagagctttcaggatactgtgaggactattttggtcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtcaagcttgataagccaagaaagagctttcaggatactgtgaggactattttggtcacc 615
Query: 361 cttcacttcctgcattctttgaagaaaaatcgcaggttatctgccaaatctgtttggaat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cttcacttcctgcattctttgaagaaaaatcgcaggttatctgccaaatctgtttggaac 675
Query: 421 agcttgagtaaggataaggagttgagcttttgtgagttgaagccttcacaaaaggactta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agcttgagtaaggataaggagttgagcttttgtgagttgaagccttcacaaaaggactta 735
Query: 481 ttggaccatgtgactttaattggtgaagctgccaagagggatgctgtcttagcta 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttggaccatgtgactttaattggtgaagctgccaagagggatgctgtcttagcta 790
>gnl|LJGI|TC66233
Length = 961
Score = 103 bits (52), Expect = 3e-21
Identities = 97/111 (87%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 398 tatctgccaaatctgtttggaatagcttgagtaaggataaggagttgagcttttgtgagt 457
||||||||| ||||| |||||||||||| ||| |||||||||| ||||||||||| | ||
Sbjct: 143 tatctgccagatctgcttggaatagctttagtgaggataaggaattgagcttttgcgggt 202
Query: 458 tgaagccttcacaaaaggacttattggaccatgtgactttaattggtgaag 508
| ||||||||||||| |||||| |||||| |||||||| ||||||||||
Sbjct: 203 t--agccttcacaaaatgacttagcggaccaggtgactttgattggtgaag 251
>gnl|LJGI|TC70618
Length = 757
Score = 99.6 bits (50), Expect = 5e-20
Identities = 89/101 (88%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 408 atctgtttggaatagcttgagtaaggataaggagttgagcttttgtgagttgaagccttc 467
||||| |||||||||||| ||| |||||||||| ||||||||||||| ||| |||||||
Sbjct: 266 atctgcttggaatagctttagtgaggataaggaattgagcttttgtgggtt--agccttc 323
Query: 468 acaaaaggacttattggaccatgtgactttaattggtgaag 508
|||||| |||||| |||||| |||||||| ||||||||||
Sbjct: 324 acaaaatgacttagcggaccaggtgactttgattggtgaag 364
>gnl|LJGI|AV779915 weakly similar to UniRef100_A7P0H2 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 534
Score = 54.0 bits (27), Expect = 2e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 286 aaggatggaaagtgggtcaagcttgataagccaagaaagagctttcaggatactgtgagg 345
|||||||| ||||||||||| ||| | ||||| |||||||||| | ||||||| | |||
Sbjct: 389 aaggatgggaagtgggtcaaacttcagaagccgagaaagagctatgaggataccataagg 448
Query: 346 actattttggtcacccttcacttcctg 372
|| ||||| ||||| |||| ||||||
Sbjct: 449 acgattttcatcaccattcatttcctg 475