Miyakogusa Predicted Gene

Lj2g3v2124250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2124250.1 Non Chatacterized Hit- tr|D8R129|D8R129_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,60.53,1e-18,seg,NULL; Complex1_LYR,Complex 1 LYR
protein,CUFF.38581.1
         (277 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70117 similar to UniRef100_A9SZR7 Cluster: Predicted ...   549   e-156

>gnl|LJGI|TC70117 similar to UniRef100_A9SZR7 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (48%)
          Length = 677

 Score =  549 bits (277), Expect = e-156
 Identities = 277/277 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggagtccaaaggctatctgggatgcagaagcaagtgctcagcttatacagagggttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgggagtccaaaggctatctgggatgcagaagcaagtgctcagcttatacagagggttt 228

                                                                       
Query: 61  ctgcgtgcagcgcgctctaaatctgaagaggaacgccgcaacatggagtccatagtatcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ctgcgtgcagcgcgctctaaatctgaagaggaacgccgcaacatggagtccatagtatcg 288

                                                                       
Query: 121 caagagtttcgccgcaattccaaggaagtggataggaagaattttctctacatagagtac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 caagagtttcgccgcaattccaaggaagtggataggaagaattttctctacatagagtac 348

                                                                       
Query: 181 ttgcttcgccgtggtacaaggcagcttgatcagctgaagaatcctggtaccactgggtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttgcttcgccgtggtacaaggcagcttgatcagctgaagaatcctggtaccactgggtta 408

                                                
Query: 241 tcttcattgcaagttgatttgtctaaattcaattagg 277
           |||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcttcattgcaagttgatttgtctaaattcaattagg 445