Miyakogusa Predicted Gene

Lj2g3v1980810.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1980810.1 tr|G7K2F8|G7K2F8_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_5g015210 PE=4 S,90.97,0,Modified
RING finger domain,U box domain; no description,Zinc finger,
RING/FYVE/PHD-type; no descrip,CUFF.38151.1
         (1352 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599839 similar to UniRef100_Q058P4 Cluster: At3g49810...   414   e-115
gnl|LJGI|FS318156 similar to UniRef100_A7QZC7 Cluster: Chromosom...   131   1e-29
gnl|LJGI|TC57938 similar to UniRef100_A7NUB3 Cluster: Chromosome...   131   1e-29
gnl|LJGI|GO023027 similar to UniRef100_A7NUB3 Cluster: Chromosom...   123   3e-27

>gnl|LJGI|DC599839 similar to UniRef100_Q058P4 Cluster: At3g49810; n=1; Arabidopsis
           thaliana|Rep: At3g49810 - Arabidopsis thaliana
           (Mouse-ear cress), partial (9%)
          Length = 563

 Score =  414 bits (209), Expect = e-115
 Identities = 209/209 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccgatgtttcagccttctaaaagggacatggtggcgggatttgacggtagcggcgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atgccgatgtttcagccttctaaaagggacatggtggcgggatttgacggtagcggcgac 414

                                                                       
Query: 61  ggccagattctagatctggacaccgccgtcaaagacggtgtcctaggtggggttgacggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggccagattctagatctggacaccgccgtcaaagacggtgtcctaggtggggttgacggc 474

                                                                       
Query: 121 ggagttttgggaggtggggtttgtgagaagttggatctggcgaacatgattcaagagatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggagttttgggaggtggggtttgtgagaagttggatctggcgaacatgattcaagagatg 534

                                        
Query: 181 gagctatgtgaggttccgagtgtgttcat 209
           |||||||||||||||||||||||||||||
Sbjct: 535 gagctatgtgaggttccgagtgtgttcat 563


>gnl|LJGI|FS318156 similar to UniRef100_A7QZC7 Cluster: Chromosome chr7 scaffold_270,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_270, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 783

 Score =  131 bits (66), Expect = 1e-29
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                       
Query: 205 ttcatttgtccaatctcgcttgagccaatgcaagaccctgtgactctctgcactggccaa 264
           ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 334 ttcatctgtccaatctctcttgagccaatgcaggaccctgtgaccctttgcactggccaa 393

                                                                       
Query: 265 acctacgagaggtccaacattctcaaatggttcaaccttggccacttcacatgccccacc 324
           ||||| || || |||||||| ||||||||||||   ||||| |||   || || ||||| 
Sbjct: 394 acctatgacagatccaacatcctcaaatggttctcacttggtcacaaaacttgtcccaca 453

                                     
Query: 325 acgatgcaagagctttgggatgattc 350
           || |||||||||||||||||||||||
Sbjct: 454 acaatgcaagagctttgggatgattc 479



 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 592 ttgttaggtccttttacttcccatgctgttggctctgaag 631
           |||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 724 ttgttaggtcctttcacttcacatgctgtaggctctgaag 763


>gnl|LJGI|TC57938 similar to UniRef100_A7NUB3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1527

 Score =  131 bits (66), Expect = 1e-29
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                       
Query: 205 ttcatttgtccaatctcgcttgagccaatgcaagaccctgtgactctctgcactggccaa 264
           ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 224 ttcatctgtccaatctctcttgagccaatgcaggaccctgtgaccctttgcactggccaa 283

                                                                       
Query: 265 acctacgagaggtccaacattctcaaatggttcaaccttggccacttcacatgccccacc 324
           ||||| || || |||||||| ||||||||||||   ||||| |||   || || ||||| 
Sbjct: 284 acctatgacagatccaacatcctcaaatggttctcacttggtcacaaaacttgtcccaca 343

                                     
Query: 325 acgatgcaagagctttgggatgattc 350
           || |||||||||||||||||||||||
Sbjct: 344 acaatgcaagagctttgggatgattc 369



 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 592 ttgttaggtccttttacttcccatgctgttggctctgaag 631
           |||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 611 ttgttaggtcctttcacttcacatgctgtaggctctgaag 650


>gnl|LJGI|GO023027 similar to UniRef100_A7NUB3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (32%)
          Length = 668

 Score =  123 bits (62), Expect = 3e-27
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                       
Query: 205 ttcatttgtccaatctcgcttgagccaatgcaagaccctgtgactctctgcactggccaa 264
           ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 282 ttcatctgtccaatctctcttgagccaatgcaggaccctgtgaccctttgcactggccaa 341

                                                                       
Query: 265 acctacgagaggtccaacattctcaaatggttcaaccttggccacttcacatgccccacc 324
           ||||| || || |||||||| ||||||||||||   ||||| |||   || || ||||| 
Sbjct: 342 acctatgacagatccaacatcctcaaatggttctcacttggtcacaaaacttgtcccaca 401

                                     
Query: 325 acgatgcaagagctttgggatgattc 350
           || ||||||||| |||||||||||||
Sbjct: 402 acaatgcaagagttttgggatgattc 427