Miyakogusa Predicted Gene
- Lj2g3v1757070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1757070.1 Non Chatacterized Hit- tr|I1LHT0|I1LHT0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52150 PE,56.25,0,no
description,Homeodomain-like; seg,NULL;
Homeodomain-like,Homeodomain-like; ZF-HD_dimer,ZF-HD home,CUFF.37976.1
(1017 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW607624 similar to UniRef100_A7PUT9 Cluster: Chromosom... 793 0.0
gnl|LJGI|FS349240 similar to UniRef100_A7PUT9 Cluster: Chromosom... 113 2e-24
gnl|LJGI|TC72531 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC81711 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 56 4e-07
>gnl|LJGI|BW607624 similar to UniRef100_A7PUT9 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 476
Score = 793 bits (400), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Minus
Query: 618 tgcaccacaaccgctgccaccgccacaaaactcttctcttagattttcccacgcggcggc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgcaccacaaccgctgccaccgccacaaaactcttctcttagattttcccacgcggcggc 417
Query: 678 gggtactactcctacggcgggtccggttccagttccgccgttgatgatggctttcggagg 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gggtactactcctacggcgggtccggttccagttccgccgttgatgatggctttcggagg 357
Query: 738 cgctgccgcggagtcgtcgagcgaagatctgaacatgttccagcgtaacgcgggagcaca 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cgctgccgcggagtcgtcgagcgaagatctgaacatgttccagcgtaacgcgggagcaca 297
Query: 798 ggaggcggcggcgctatcgaggaagaggcataggacgaaattctcgagccagcagaagga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ggaggcggcggcgctatcgaggaagaggcataggacgaaattctcgagccagcagaagga 237
Query: 858 taggatgatggagtttgctgagaagattgggtggaggatccagaaacaggatgaggaaga 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 taggatgatggagtttgctgagaagattgggtggaggatccagaaacaggatgaggaaga 177
Query: 918 ggtgcagcagttttgttctcaagtgggtgtgaggagaaaggttttcaaggtttggatgca 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggtgcagcagttttgttctcaagtgggtgtgaggagaaaggttttcaaggtttggatgca 117
Query: 978 taataacaagcaagcaatgaagaaattacaccaaatgtaa 1017
||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 taataacaagcaagcaatgaagaaattacaccaaatgtaa 77
>gnl|LJGI|FS349240 similar to UniRef100_A7PUT9 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 689
Score = 113 bits (57), Expect = 2e-24
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 853 aaggataggatgatggagtttgctgagaagattgggtggaggatccagaaacaggatgag 912
||||| ||||||||||||||||||||||| | ||||||| ||||||||| || |||||
Sbjct: 521 aaggacaggatgatggagtttgctgagaaactggggtggaagatccagaagcaagatgaa 462
Query: 913 gaagaggtgcagcagttttgttctcaagtgggtgtgaggagaaaggttttcaaggtttgg 972
|| || ||| |||| || || ||||| || ||||| | ||| ||| |||||||||||||
Sbjct: 461 gaggaagtgaagcaattctgctctcatgttggtgtaaaaagacaggctttcaaggtttgg 402
Query: 973 atgcataataacaagcaagcaatgaagaa 1001
||||| |||| ||||||||||||||||||
Sbjct: 401 atgcacaatagcaagcaagcaatgaagaa 373
>gnl|LJGI|TC72531 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1297
Score = 63.9 bits (32), Expect = 2e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 944 gtgtgaggagaaaggttttcaaggtttggatgcataataacaag 987
||||||||||||| ||| |||||||||||||||| |||||||||
Sbjct: 947 gtgtgaggagaaacgttctcaaggtttggatgcacaataacaag 990
>gnl|LJGI|TC81711 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 840
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 848 agcagaaggataggatgatggagtttgctgagaagattgggtggaggatccagaaacagg 907
|||||||||||| |||| |||| ||||| |||| | | ||||||||||||||||| || |
Sbjct: 195 agcagaaggataagatgctggaatttgcggagagggtagggtggaggatccagaagcatg 254
Query: 908 atga 911
||||
Sbjct: 255 atga 258