Miyakogusa Predicted Gene
- Lj2g3v1718710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1718710.1 tr|A0FK50|A0FK50_CHLRE Chloroplast Rat1
OS=Chlamydomonas reinhardtii GN=RAT1 PE=4
SV=1,38.84,3e-19,UNCHARACTERIZED,Coiled-coil domain-containing protein
90; UNCHARACTERIZED,NULL; coiled-coil,NULL; DU,CUFF.37723.1
(393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57582 similar to UniRef100_A7QE30 Cluster: Chromosome... 381 e-105
gnl|LJGI|TC62397 similar to UniRef100_A7QE30 Cluster: Chromosome... 151 4e-36
>gnl|LJGI|TC57582 similar to UniRef100_A7QE30 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 908
Score = 381 bits (192), Expect = e-105
Identities = 339/388 (87%)
Strand = Plus / Plus
Query: 1 atgcaaaggactgagatgctacaagaagccaacctgtccaaattcaaagctgaagtgcag 60
||||||| ||||| ||| | |||||| |||||||||||||||||||| | ||||| |||
Sbjct: 149 atgcaaaaaactgaaatgattcaagaatccaacctgtccaaattcaaatcagaagtacag 208
Query: 61 agctcacagggacaccatttctctctgcttcaacatgagacagagaagcttaggaatgat 120
||||| |||||||||||||| |||||| | ||||||||||| || |||||||||||||||
Sbjct: 209 agctcccagggacaccatttttctctgttgcaacatgagactgaaaagcttaggaatgat 268
Query: 121 attgagaagatgcgcagtgaattgaggtatgagatagataaagtcactgctggccagcgg 180
|| ||||||||||||||||||||||| ||||| || ||||| ||||| ||||| || ||
Sbjct: 269 atagagaagatgcgcagtgaattgagatatgaaatggataaggtcaccgctgggcaacga 328
Query: 181 ttggatttgaaccttgaaagggggaggattagggaggaactggccaatcagaatgctgaa 240
|||||| ||||||||||||||||||| || ||||| |||||| |||| |||| |||||||
Sbjct: 329 ttggatatgaaccttgaaagggggagaataagggaagaactgtccaaccagagtgctgaa 388
Query: 241 actaacaacctgactaacaaacttgacagagagatccatgctctgagagcacatctggaa 300
| || || ||| || ||||||||||| |||||||||||| || | |||||||| |||||
Sbjct: 389 aatagcagcctcacaaacaaacttgatagagagatccattctttaagagcacagatggaa 448
Query: 301 gcagccaaatatgatgtgataaaatactgcataggaacccttgtttcaatatctgctgtt 360
||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 449 gcagccaaatatgatgtcataaaatactgcataggatcacttgtttcaatctctgctgtt 508
Query: 361 ggccttgctgttcttcgcatcttgatgt 388
|||||||||||| | ||||| |||||||
Sbjct: 509 ggccttgctgttatccgcatattgatgt 536
>gnl|LJGI|TC62397 similar to UniRef100_A7QE30 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 822
Score = 151 bits (76), Expect = 4e-36
Identities = 124/140 (88%)
Strand = Plus / Plus
Query: 1 atgcaaaggactgagatgctacaagaagccaacctgtccaaattcaaagctgaagtgcag 60
||||||| ||||| ||| | |||||| |||||||||||||||||||| | ||||| |||
Sbjct: 647 atgcaaaaaactgaaatgattcaagaatccaacctgtccaaattcaaatcagaagtacag 706
Query: 61 agctcacagggacaccatttctctctgcttcaacatgagacagagaagcttaggaatgat 120
||||| |||||||||||||| |||||| | ||||||||||| || |||||||||||||||
Sbjct: 707 agctcccagggacaccatttttctctgttgcaacatgagactgaaaagcttaggaatgat 766
Query: 121 attgagaagatgcgcagtga 140
|| |||||||||||||||||
Sbjct: 767 atagagaagatgcgcagtga 786