Miyakogusa Predicted Gene

Lj2g3v1644320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1644320.1 Non Chatacterized Hit- tr|D8SQR8|D8SQR8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.97,3e-19,NUCLEOPORIN-RELATED,NULL; Dirigent,Plant disease
resistance response protein,CUFF.37568.1
         (541 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63474 similar to UniRef100_A7R5A6 Cluster: Chromosome...   492   e-138

>gnl|LJGI|TC63474 similar to UniRef100_A7R5A6 Cluster: Chromosome undetermined
           scaffold_923, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_923,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (70%)
          Length = 796

 Score =  492 bits (248), Expect = e-138
 Identities = 403/454 (88%), Gaps = 3/454 (0%)
 Strand = Plus / Plus

                                                                       
Query: 80  acctcaaatcccttcacttctctctatttcaacatgaaaccataaacaaaacagcatatg 139
           ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||
Sbjct: 137 acctcaaatcccttcacttctctctgtttcaacatgaaaccataaacagaacaggatatg 196

                                                                       
Query: 140 gcatagtgaatggagtggaaggat---caggattcactgacaccacagccccttttggca 196
            |||||||||||||||| |||||    ||||| ||||||| |||||| ||||||||||||
Sbjct: 197 tcatagtgaatggagtgcaaggagggccaggaatcactgaaaccacaaccccttttggca 256

                                                                       
Query: 197 ctcttgctgtctttcaggactctttgactgtgacagcaaatagatcctccaaacttgttg 256
           ||||   ||||||||||||| |||||||||| ||||| || |||||||||||||||||||
Sbjct: 257 ctctatttgtctttcaggaccctttgactgtcacagccaacagatcctccaaacttgttg 316

                                                                       
Query: 257 gaattgcagagggaactgccatcacctctagcctcgacgggcttcgatgcatttcaattg 316
           ||||||| ||||||||| |||||||||| ||||| || ||||||||  ||||||| ||||
Sbjct: 317 gaattgctgagggaacttccatcacctcaagccttgatgggcttcgcagcatttcgattg 376

                                                                       
Query: 317 ccaagctaactttgcgtctgaaaaatcacagaggttctgtttccattgttggaggcacta 376
           | ||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||  
Sbjct: 377 cgaagctaactctgcgcctgaaaaatcacaggggttctgtttccattgttggaggtacac 436

                                                                       
Query: 377 ataatgccaagccttcagatcatccagtagttggaggcactgaagatttcttgtttgtgc 436
           ||||||  |||||||||||||||||| |||| ||||| || |||||||||||||||||||
Sbjct: 437 ataatgttaagccttcagatcatccaatagtgggaggtacagaagatttcttgtttgtgc 496

                                                                       
Query: 437 aaggctatattaccacttcacctgttgatgtaaagggtgtttcagttgtctacaagattg 496
           |||||||| ||||| |||| ||||||||| ||||||||||| | |||  |||||||||||
Sbjct: 497 aaggctatgttacctcttctcctgttgatctaaagggtgttaccgttacctacaagattg 556

                                             
Query: 497 agtttcatctttactggcctccatatgcaactca 530
           | |||||||| ||||||||||| |||||||||||
Sbjct: 557 aatttcatctatactggcctccttatgcaactca 590