Miyakogusa Predicted Gene
- Lj2g3v1550200.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1550200.2 tr|G7K5E9|G7K5E9_MEDTR Beta-amylase OS=Medicago
truncatula GN=MTR_5g026210 PE=3 SV=1,88.89,0,no description,Glycoside
hydrolase, catalytic domain; seg,NULL; (Trans)glycosidases,Glycoside
hydrol,CUFF.37424.2
(1974 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81565 similar to UniRef100_A7QKP8 Cluster: Chromosome... 1542 0.0
gnl|LJGI|TC76317 similar to UniRef100_A7QKP8 Cluster: Chromosome... 1162 0.0
gnl|LJGI|GO034644 homologue to UniRef100_A7QKP8 Cluster: Chromos... 351 1e-95
gnl|LJGI|BP063528 homologue to UniRef100_A7QKP8 Cluster: Chromos... 178 9e-44
>gnl|LJGI|TC81565 similar to UniRef100_A7QKP8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 794
Score = 1542 bits (778), Expect = 0.0
Identities = 788/790 (99%), Gaps = 1/790 (0%)
Strand = Plus / Plus
Query: 9 caccaacgacgacgtttccgcacaagatctcgaccctcaaagcgatcacagctccgatta 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccaacgacgacgtttccgcacaagatctcgaccctcaaagcgatcacagctccgatta 60
Query: 69 cttagcacactctcaccaattgtctcagccgcagcctcgccgcccccgcggcttcgccgc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttagcacactctcaccaattgtctcagccgcagcctcgccgcccccgcggcttcgccgc 120
Query: 129 ggcggcagcgggggtcaattccgccggaaaggggaagaaggagagggagaaagaaaagga 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcggcagcgggggtcaattccgccggaaaggggaagaaggagagggagaaagaaaagga 180
Query: 189 gcggacgaagctccgggagcggcaccgccgtgccatcactagccgcatgctcgccggact 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcggacgaagctccgggagcggcaccgccgtgccatcactagccgcatgctcgccggact 240
Query: 249 ccgtcagtatggcaatttccctctgccggcgcgtgcggacatgaacgacgtgctcgctgc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgtcagtatggcaatttccctctgccggcgcgtgcggacatgaacgacgtgctcgctgc 300
Query: 309 tctcgcgcgtgaggctggttgggtcgtcgacgccgatggcaccacctatcgccagtgtcc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctcgcgcgtgaggctggttgggtcgtcgacgccgatggcaccacctatcgccagtgtcc 360
Query: 369 ccctccttctcacatgggatcatttgccgcagcgaggtcagtcgaaactcaactctctgc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccctccttctcacatgggatcatttgccgcagcgaggtcagtcgaaactcaactctctgc 420
Query: 429 tggttccttgagagcttgctccgttaaggaaacgttagagaatcagccgccagttcttag 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggttccttgagagcttgctccgttaaggaaacgttagagaatcagccgccagttcttag 480
Query: 489 aattgatgaatgcttgtcgcctgcgtccattgattctgttgtacttgcagaaagggactc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aattgatgaatgcttgtcgcctgcgtccattgattctgttgtacttgcagaaagggactc 540
Query: 549 gaagagtaggaagttcgcgagtgcgagccccatcgattcagttgactgcttggaagctga 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagagtaggaagttcgcgagtgcgagccccatcgattcagttgactgcttggaagctga 600
Query: 609 tcagcttatgcaagttatgcatactggggtgcatgaaaatgactttactggcacgccata 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcagcttatgcaagttatgcatactggggtgcatgaaaatgactttactggcacgccata 660
Query: 669 cgttcctgtttacataaagcttccagttggtattatcaacaaattttgtcagttgattga 728
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 cgttcctgtttacataaagcttccagttggtattatcaac-aattttgtcagttgattga 719
Query: 729 tcctgaaggcattagacaggagctaatccatattaagtctttaaatatagacggtgttgt 788
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 720 tcctgaaggcattagacaggagctaatccctattaagtctttaaatatagacggtgttgt 779
Query: 789 tgtggattgt 798
||||||||||
Sbjct: 780 tgtggattgt 789
>gnl|LJGI|TC76317 similar to UniRef100_A7QKP8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 869
Score = 1162 bits (586), Expect = 0.0
Identities = 596/598 (99%), Gaps = 1/598 (0%)
Strand = Plus / Plus
Query: 1378 ttcttttgcgagcgaggtgattatgacaactattatggacgcttcttcttgcattggtac 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcttttgcgagcgaggtgattatgacaactattatggacgcttcttcttgcattggtac 60
Query: 1438 tcccagacattagtagaccatgcggataatgttttgtctcttgcaagccttgcttttgag 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcccagacattagtagaccatgcggataatgttttgtctcttgcaagccttgcttttgag 120
Query: 1498 gaaacacaaataattgttaaggttcctgcagtatactggtggtataagacacctagtcat 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaacacaaataattgttaaggttcctgcagtatactggtggtataagacacctagtcat 180
Query: 1558 gcagcagagttgacagcaggatatcacaaccccac-aaatcaggatgggtattcgcctgt 1616
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 gcagcagagttgacagcaggatatcacaaccccaccaaatcaggatgggtattcgcctgt 240
Query: 1617 gtttgaggttctgaaaaaacatgccgtcacgatgaaatttgtctgcttaggatttcatct 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttgaggttctgaaaaaacatgccgtcacgatgaaatttgtctgcttaggatttcatct 300
Query: 1677 ttccagccaggaagctaatgaatcattggttgatcctgagggtttgagttggcaagtatt 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttccagccaggaagctaatgaatcattggttgatcctgagggtttgagttggcaagtatt 360
Query: 1737 aaactcagcttgggatcgggggttgattgccgccggagagaatgcactcctttgctatga 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaactcagcttgggatcgggggttgattgccgccggagagaatgcactcctttgctatga 420
Query: 1797 tagagaagggcacaagagattagttgagatggcaaagcccagaaatgatccagatcgccg 1856
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 tagagaagggcacaagagattagttgagatggccaagcccagaaatgatccagatcgccg 480
Query: 1857 gcacttctcattctttgtgtatcagcaaccgtctttgcttcagggaaatccttgcttgtc 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcacttctcattctttgtgtatcagcaaccgtctttgcttcagggaaatccttgcttgtc 540
Query: 1917 agaattggatttcttcatcaaatgcatgcatggtgaaatgacaggggatttgtaatgg 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaattggatttcttcatcaaatgcatgcatggtgaaatgacaggggatttgtaatgg 598
>gnl|LJGI|GO034644 homologue to UniRef100_A7QKP8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 189
Score = 351 bits (177), Expect = 1e-95
Identities = 186/189 (98%)
Strand = Plus / Plus
Query: 1046 ggggaattgacaaagaacgggttctcaaaggcagaactggaattgaggtctattttgata 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ggggaattgacaaagaacgggttctcaaaggcagaactggaattgaggtctattttggta 60
Query: 1106 tgatgagaagcttccgtactgagtttgatgacctatttgccgaaggtctgatttcttcag 1165
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatgagaagcttccgtactgagtttgatgacctatttgccgaaggtctgatttcttcac 120
Query: 1166 tagaaattggactaggagcatctggggagctgaaatacccttctttttcagaaagaatgg 1225
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 tagaaattggactaggagcatctggggagctgaagtacccttctttttcagaaagaatgg 180
Query: 1226 gatggaggt 1234
|||||||||
Sbjct: 181 gatggaggt 189
>gnl|LJGI|BP063528 homologue to UniRef100_A7QKP8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 475
Score = 178 bits (90), Expect = 9e-44
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1861 ttctcattctttgtgtatcagcaaccgtctttgcttcagggaaatccttgcttgtcagaa 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttctcattctttgtgtatcagcaaccgtctttgcttcagggaaatccttgcttgtcagaa 416
Query: 1921 ttggatttcttcatcaaatgcatgcatggt 1950
||||||||||||||||||||||||||||||
Sbjct: 415 ttggatttcttcatcaaatgcatgcatggt 386
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1948 ggtgaaatgacaggggatttgtaatgg 1974
|||||||||||||||||||||||||||
Sbjct: 137 ggtgaaatgacaggggatttgtaatgg 111