Miyakogusa Predicted Gene

Lj2g3v1549610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1549610.1 tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus PE=2
SV=1,100,0,CLPPROTEASEP,ClpP; CLP_protease,ClpP/TepA;
ClpP/crotonase,NULL; ATP-DEPENDENT CLP PROTEASE PROTEOLYT,CUFF.37397.1
         (477 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68135 similar to UniRef100_Q94B60 Cluster: ATP-depend...   946   0.0  

>gnl|LJGI|TC68135 similar to UniRef100_Q94B60 Cluster: ATP-dependent Clp protease
           proteolytic subunit 4, chloroplast precursor; n=1;
           Arabidopsis thaliana|Rep: ATP-dependent Clp protease
           proteolytic subunit 4, chloroplast precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (80%)
          Length = 1262

 Score =  946 bits (477), Expect = 0.0
 Identities = 477/477 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctatctatgacgctgtccagcttgtgagggctgacgtttccacaatcgcacttggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atggctatctatgacgctgtccagcttgtgagggctgacgtttccacaatcgcacttggc 543

                                                                       
Query: 61  attgcagcatcaacagcctcaatcatccttggtggtggaaccaaaggcaagcgcttcgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 attgcagcatcaacagcctcaatcatccttggtggtggaaccaaaggcaagcgcttcgct 603

                                                                       
Query: 121 atgcccaatacgcgaatcatgattcaccaaccccttggaggtgctagtggacaagctata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 atgcccaatacgcgaatcatgattcaccaaccccttggaggtgctagtggacaagctata 663

                                                                       
Query: 181 gatgtggaaattcaggctaaagaagtcatgcacaacaagaacaatgtcacaagaattata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gatgtggaaattcaggctaaagaagtcatgcacaacaagaacaatgtcacaagaattata 723

                                                                       
Query: 241 tcaggcttcaccggtcgcacatttgaacaagtccagaaagacattgacagggatagatac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcaggcttcaccggtcgcacatttgaacaagtccagaaagacattgacagggatagatac 783

                                                                       
Query: 301 atgtctccaattgaagctgttgaatatggaatcattgatggggtgatcgataaagagagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atgtctccaattgaagctgttgaatatggaatcattgatggggtgatcgataaagagagt 843

                                                                       
Query: 361 attattcctcttgaaccagtgccagaaagagtgagatcaacactgaactatgaagaaata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 attattcctcttgaaccagtgccagaaagagtgagatcaacactgaactatgaagaaata 903

                                                                    
Query: 421 agcaaagaccctaggaaattccttaccccagagatccctgatgatgagatatactag 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 agcaaagaccctaggaaattccttaccccagagatccctgatgatgagatatactag 960