Miyakogusa Predicted Gene
- Lj2g3v1468540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1468540.1 Non Chatacterized Hit- tr|C0JP19|C0JP19_LOTJA
Putative basic helix-loop-helix protein BHLH22
OS=Lotu,100,0,coiled-coil,NULL; helix loop helix
domain,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding,CUFF.37264.1
(1814 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66277 similar to UniRef100_Q41102 Cluster: Phaseolin ... 1542 0.0
gnl|LJGI|TC73714 similar to UniRef100_Q400L2 Cluster: MYC2; n=1;... 533 e-150
gnl|LJGI|AW719924 homologue to UniRef100_Q9MFC6 Cluster: Orf107b... 151 2e-35
gnl|LJGI|FS339250 similar to UniRef100_Q41101 Cluster: Phaseolin... 96 9e-19
gnl|LJGI|TC66068 similar to UniRef100_Q41101 Cluster: Phaseolin ... 70 5e-11
gnl|LJGI|TC81133 similar to UniRef100_A7PUP8 Cluster: Chromosome... 66 8e-10
>gnl|LJGI|TC66277 similar to UniRef100_Q41102 Cluster: Phaseolin G-box binding protein
PG2; n=1; Phaseolus vulgaris|Rep: Phaseolin G-box binding
protein PG2 - Phaseolus vulgaris (Kidney bean) (French
bean), partial (40%)
Length = 1350
Score = 1542 bits (778), Expect = 0.0
Identities = 778/778 (100%)
Strand = Plus / Plus
Query: 1037 gcagcagtaaccaccagcatctgaagccggaatccggtgagattctgagcttcggtgaca 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagcagtaaccaccagcatctgaagccggaatccggtgagattctgagcttcggtgaca 60
Query: 1097 gcaagagaacccccaatttcttctccggccagtcgcagttcgttccggctgtcgaggaga 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaagagaacccccaatttcttctccggccagtcgcagttcgttccggctgtcgaggaga 120
Query: 1157 acaacaacgggaagaagaggtcaccgaattcgagaagcagcaacgacgacgggatgcttt 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaacaacgggaagaagaggtcaccgaattcgagaagcagcaacgacgacgggatgcttt 180
Query: 1217 cattcacctccggcgtgattctcccgtcctcgaatttgaaatcctccaccggcggcggcg 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattcacctccggcgtgattctcccgtcctcgaatttgaaatcctccaccggcggcggcg 240
Query: 1277 attcggagcattcagatctggaagcttcggtggtgaaggaagccgacagcagcaggttgg 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attcggagcattcagatctggaagcttcggtggtgaaggaagccgacagcagcaggttgg 300
Query: 1337 tggagccggagaagcgacctaggaagagggggaggaaaccggcgaacggcagagaggaac 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggagccggagaagcgacctaggaagagggggaggaaaccggcgaacggcagagaggaac 360
Query: 1397 cgttgaaccacgttgaagcagagaggcagaggagggagaagcttaaccagagattctacg 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgttgaaccacgttgaagcagagaggcagaggagggagaagcttaaccagagattctacg 420
Query: 1457 cgcttcgcgcggtggttccgaacgtgtcgaagatggacaaagcttcactgctaggagacg 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgcttcgcgcggtggttccgaacgtgtcgaagatggacaaagcttcactgctaggagacg 480
Query: 1517 ctatatcctacatcacggagctgaagaccaagcttcagagttcagaatcggataaaactg 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctatatcctacatcacggagctgaagaccaagcttcagagttcagaatcggataaaactg 540
Query: 1577 ggttgcagaagcaatttgatgcgatgaagaaggagctggagaaaaccagtgaacagtctt 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggttgcagaagcaatttgatgcgatgaagaaggagctggagaaaaccagtgaacagtctt 600
Query: 1637 cttctccaactccacctccacctaacaagaacaagtccttctcctcatcctcctcctctt 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttctccaactccacctccacctaacaagaacaagtccttctcctcatcctcctcctctt 660
Query: 1697 ccaatcagattctagtggaggacattgacgtgaagatcattgggtgggatgcaatgataa 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccaatcagattctagtggaggacattgacgtgaagatcattgggtgggatgcaatgataa 720
Query: 1757 gggtccaatgcagcaagaagaaccacccggccgcgattttgatggcggcgttgatgga 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggtccaatgcagcaagaagaaccacccggccgcgattttgatggcggcgttgatgga 778
>gnl|LJGI|TC73714 similar to UniRef100_Q400L2 Cluster: MYC2; n=1; Catharanthus
roseus|Rep: MYC2 - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle), partial (17%)
Length = 588
Score = 533 bits (269), Expect = e-150
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 1 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctccgac 182
Query: 61 ttatcctccgtctggccaccagcgccgcctcctccctctcaatcctccgtcgccgtcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttatcctccgtctggccaccagcgccgcctcctccctctcaatcctccgtcgccgtcctc 242
Query: 121 aaccaggacactctccagcaacgcctccaggccctaatcgaaggcgcaagagagacctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaccaggacactctccagcaacgcctccaggccctaatcgaaggcgcaagagagacctgg 302
Query: 181 acctacgccattttctggcaaccttcctacgactactccggcacctccctcctcggctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acctacgccattttctggcaaccttcctacgactactccggcacctccctcctcggctgg 362
Query: 241 ggcgacggttactacaaaggcgaagagga 269
|||||||||||||||||||||||||||||
Sbjct: 363 ggcgacggttactacaaaggcgaagagga 391
Score = 315 bits (159), Expect = 5e-85
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 308 cctcctccgctgaacaagaacaccgccggaaggtgcttcgtgacttgaattccctcatct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cctcctccgctgaacaagaacaccgccggaaggtgcttcgtgacttgaattccctcatct 489
Query: 368 ccggttcctccgcccccgcttctgatgacgctgtcgacgaagaggtcaccgacacggaat 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ccggttcctccgcccccgcttctgatgacgctgtcgacgaagaggtcaccgacacggaat 549
Query: 428 ggttcttccttgtttccatgacccagtcgtttgtcaacg 466
|||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggttcttccttgtttccatgacccagtcgtttgtcaacg 588
>gnl|LJGI|AW719924 homologue to UniRef100_Q9MFC6 Cluster: Orf107b protein; n=1; Beta
vulgaris subsp. vulgaris|Rep: Orf107b protein - Beta
vulgaris subsp. vulgaris, partial (78%)
Length = 505
Score = 151 bits (76), Expect = 2e-35
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctccgac 145
Query: 61 ttatcctccgtctggc 76
||||||||||||||||
Sbjct: 146 ttatcctccgtctggc 161
>gnl|LJGI|FS339250 similar to UniRef100_Q41101 Cluster: Phaseolin G-box binding
protein PG1; n=1; Phaseolus vulgaris|Rep: Phaseolin
G-box binding protein PG1 - Phaseolus vulgaris (Kidney
bean) (French bean), partial (25%)
Length = 721
Score = 95.6 bits (48), Expect = 9e-19
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 403 gacgaagaggtcaccgacacggaatggttcttccttgtttccatgacccagtcgtttgtc 462
|||||||||||||||||||| || |||||||||||||| || ||||| ||||| || |||
Sbjct: 564 gacgaagaggtcaccgacactgagtggttcttccttgtgtcgatgacgcagtctttcgtc 623
Query: 463 aacggcggcgggctagctggtcaggcgtatttcaactcca 502
|||||| |||| || ||||||||||||| ||||| ||||
Sbjct: 624 aacggcagcggcctccctggtcaggcgtacttcaattcca 663
Score = 73.8 bits (37), Expect = 3e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctcc 57
|||||||||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 147 atgaatctctggtctgacgacaactcctccgtcatggaggcctttatgagctcctcc 203
>gnl|LJGI|TC66068 similar to UniRef100_Q41101 Cluster: Phaseolin G-box binding protein
PG1; n=1; Phaseolus vulgaris|Rep: Phaseolin G-box binding
protein PG1 - Phaseolus vulgaris (Kidney bean) (French
bean), partial (17%)
Length = 659
Score = 69.9 bits (35), Expect = 5e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1723 gacgtgaagatcattgggtgggatgcaatgataagggtccaatgcagcaagaagaaccac 1782
|||||||||||||| || |||||||| ||||| ||| || |||||| ||||||||||||
Sbjct: 142 gacgtgaagatcatgggttgggatgcgatgattaggatcgaatgcaagaagaagaaccac 201
Query: 1783 ccggccg 1789
|||||||
Sbjct: 202 ccggccg 208
>gnl|LJGI|TC81133 similar to UniRef100_A7PUP8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 604
Score = 65.9 bits (33), Expect = 8e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 1387 agagaggaaccgttgaaccacgttgaagcagagaggcagaggagggagaagcttaaccag 1446
||||||||||| |||| || |||||||| |||||||| || |||||||||||||||||
Sbjct: 396 agagaggaaccactgaatcatgttgaagccgagaggcaaagacgggagaagcttaaccag 455
Query: 1447 agatt 1451
|||||
Sbjct: 456 agatt 460