Miyakogusa Predicted Gene
- Lj2g3v1468420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1468420.1 Non Chatacterized Hit- tr|B7FJU7|B7FJU7_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,79.72,0,Bet
v1-like,NULL; no description,START-like domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL;,CUFF.37221.1
(646 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79618 similar to UniRef100_Q2A958 Cluster: Streptomyc... 809 0.0
gnl|LJGI|AV766229 similar to UniRef100_A7PC91 Cluster: Chromosom... 416 e-116
gnl|LJGI|TC75639 similar to UniRef100_A7QFE4 Cluster: Chromosome... 74 1e-12
gnl|LJGI|TC76702 similar to UniRef100_A7QFE4 Cluster: Chromosome... 64 1e-09
>gnl|LJGI|TC79618 similar to UniRef100_Q2A958 Cluster: Streptomyces cyclase/dehydrase
family protein; n=1; Brassica oleracea|Rep: Streptomyces
cyclase/dehydrase family protein - Brassica oleracea
(Wild cabbage), partial (48%)
Length = 447
Score = 809 bits (408), Expect = 0.0
Identities = 414/416 (99%)
Strand = Plus / Plus
Query: 1 atggagaccacctctgccgccgcctccacctccgatcaccagcaaggttccgacgacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 atggagaccacctctgccgccgcctccacctccgatcaccagcaaggttccgacgacaag 91
Query: 61 cacctcacgcagcaccacctgactcccccctcaggcctcacccccgacgagttcgcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 cacctcacgcagcaccacctgactcccccctcaggcctcacccccgacgagttcgcctcc 151
Query: 121 ctcatccccgccgtcacggagcaccacacctacctcacaggcaacggccaatgctcctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ctcatccccgccgtcacggagcaccacacctacctcacaggcaacggccaatgctcctcc 211
Query: 181 ttactcgcccaacgtatccacgcgccaccagacgccgtctggtccgtcgtccgccgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttactcgcccaacgtatccacgcgccaccagacgccgtctggtccgtcgtccgccgcttc 271
Query: 241 gacaagccacagtcctacaaacacttcatcaaaagctgcgccgtcaaagacggcttccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gacaagccacagtcctacaaacacttcatcaaaagctgcgccgtcaaagacggcttccag 331
Query: 301 atgaccgttggctgcaccagagacgtcaatgtcatctccggcctcccagccgccacctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atgaccgttggctgcaccagagacgtcaatgtcatctccggcctcccagccgccacctcc 391
Query: 361 accgaaagactcgacctcctcgtcgaagaccgccgcgtcaccgggttcagcatcat 416
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 392 accgaaagactcgacctcctcgaccaagaccgccgcgtcaccgggttcagcatcat 447
>gnl|LJGI|AV766229 similar to UniRef100_A7PC91 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 571
Score = 416 bits (210), Expect = e-116
Identities = 210/210 (100%)
Strand = Plus / Minus
Query: 437 aaaactaccgctctgtcacctccgttcatggattcgacgacggtgccggtaagatctgga 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaaactaccgctctgtcacctccgttcatggattcgacgacggtgccggtaagatctgga 512
Query: 497 ccgtcgttctcgaatcctacctcgtcgacgttcccgaggggaacacagaggaagacactc 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccgtcgttctcgaatcctacctcgtcgacgttcccgaggggaacacagaggaagacactc 452
Query: 557 gcctcttcgccgatacggtggtgaggctcaaccttcagaagctcgcttccgtctccgaag 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcctcttcgccgatacggtggtgaggctcaaccttcagaagctcgcttccgtctccgaag 392
Query: 617 ggaagaaccgtgacgatgacggtaagtaag 646
||||||||||||||||||||||||||||||
Sbjct: 391 ggaagaaccgtgacgatgacggtaagtaag 362
>gnl|LJGI|TC75639 similar to UniRef100_A7QFE4 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 579
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 215 ccgtctggtccgtcgtccgccgcttcgacaagccacagtcctacaaacacttcatcaaaa 274
||||||||||||||||||||||||||||||| || ||| |||| ||| ||||| |||| |
Sbjct: 314 ccgtctggtccgtcgtccgccgcttcgacaacccccaggcctataaaaacttcgtcaaga 373
Query: 275 gctgc 279
|||||
Sbjct: 374 gctgc 378
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 418 ggcggcgagcaccgcctcaaaaactaccgctctgtcacc 456
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 514 ggcggcgaccaccgcctcaccaactaccgctctgtcacc 552
>gnl|LJGI|TC76702 similar to UniRef100_A7QFE4 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 729
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 215 ccgtctggtccgtcgtccgccgcttcgacaagccacagtcctacaaacacttcatcaaaa 274
|||||||||||||||| || ||||||||||| || || |||||||||||||| |||| |
Sbjct: 487 ccgtctggtccgtcgtgcggcgcttcgacaacccgcaagcctacaaacacttcgtcaaga 546
Query: 275 gctg 278
||||
Sbjct: 547 gctg 550