Miyakogusa Predicted Gene
- Lj2g3v1468010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1468010.1 Non Chatacterized Hit- tr|I1NBI4|I1NBI4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19533
PE,83.37,0,PROLYL-TRNA SYNTHETASE,Proline-tRNA ligase, class IIa,
archaeal-type; TRNA SYNTHETASE-RELATED,NULL; ,gene.g41633.t1.1
(1512 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66230 similar to UniRef100_A7Q0Z4 Cluster: Chromosome... 894 0.0
gnl|LJGI|BW632942 similar to UniRef100_A7Q0Z4 Cluster: Chromosom... 783 0.0
gnl|LJGI|TC62134 homologue to UniRef100_A7Q0Z4 Cluster: Chromoso... 361 8e-99
gnl|LJGI|BW596097 similar to UniRef100_A7Q0Z4 Cluster: Chromosom... 161 2e-38
gnl|LJGI|TC63029 homologue to UniRef100_A7Q0Z4 Cluster: Chromoso... 131 1e-29
>gnl|LJGI|TC66230 similar to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 960
Score = 894 bits (451), Expect = 0.0
Identities = 649/715 (90%)
Strand = Plus / Plus
Query: 798 gggagagaaagcaatggtgtggcagaactcatgggcctacagtactcgaactattggggt 857
|||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 3 gggagaaaaagcaatggcctggcaaaactcatgggcctatagtactcgaacgattggggt 62
Query: 858 gatggttatggttcatggtgatgacaagggattggtgctgcctccaaaagtagcatcagt 917
||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 63 gatggttatggttcatggtgatgacaagggattagtgcttcctcctaaagtagcatcagt 122
Query: 918 tcaagtcatagtgattcccgtgccttacaaaggtgctgatactcaaggaatcaatgatgc 977
|||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||||
Sbjct: 123 tcaagtcatagtgattcccgtgcctttcaaagatgctaatactcaaggaatctatgatgc 182
Query: 978 ctgttctgcaactgtggttacattatgcgaggcaggtattcgcgctgagttggattctag 1037
||| ||||||||||| ||||||||| || ||||||||||| ||||||| ||| ||||
Sbjct: 183 ttgtgctgcaactgtgaatacattatgtgaagcaggtattcgtgctgagtcagatactag 242
Query: 1038 agatgactatcttcctgggtggaaacattctcactgggaaatgaaaggtgttcctctaag 1097
|||| ||||| ||| || ||||| |||||||||||||||||||||| |||||||||||
Sbjct: 243 agataactattctcccggatggaagtattctcactgggaaatgaaaggcgttcctctaag 302
Query: 1098 aatagagattgggcttaaggatttggcaaataagcaggtccgcgctgttcgacgcgataa 1157
||| || ||||||| ||||||||||||||||||||||| || |||||||| || |||||
Sbjct: 303 aattgaaattgggccaaaggatttggcaaataagcaggttcgtgctgttcgtcgtgataa 362
Query: 1158 tggagaaaagatagacattgctaatgaagatttggttgaggaattgaagaagttgctgga 1217
||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 363 tggagcaaagatagacattgctaatgcagatttggttgaggaattaaagaagttgctgga 422
Query: 1218 tgatattcagcagaatctttttgatgttgccaaacaaaagcgagatgaatgtgttcaggt 1277
| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 423 taatattcagcagaatctttttgatgttgccaaacaaaaacgagatgaatgtattcagat 482
Query: 1278 catacattcatgggatgagtttgtacaagctttgaaccagagaaagatgatcttagcacc 1337
||||||| |||||||||||||| ||||||||||||| | | ||||||||||||||||||
Sbjct: 483 catacatacatgggatgagtttatacaagctttgaatgaaaaaaagatgatcttagcacc 542
Query: 1338 ttggtgtgatgaggaggaggtggaagaagatgtcaaagcaaggacagagggcgagatggg 1397
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 543 ttggtgtgatgaggaggaggtggaagcagatgtcaaagcaaggacaaggggcgagacggg 602
Query: 1398 agcagcaaagactctttgtagtccctttgatcagccagaactccctgaaggaacgatatg 1457
|||||| ||||| |||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 603 agcagctaagaccctttgtagtccctttgatcagccagaactcccagaaggcaccaaatg 662
Query: 1458 ctttgcttcaggaaggcctgccacaaagtggacatactggggcagaagttactag 1512
|||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||
Sbjct: 663 ctttgcatcaggaaagcctgcgacaaagtggtcatactggggcagaagttactag 717
>gnl|LJGI|BW632942 similar to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 463
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 1 atggcgggaagcgaagccgagaaaccttcaacgcagcaacaagaagagactggcttgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atggcgggaagcgaagccgagaaaccttcaacgcagcaacaagaagagactggcttgggg 128
Query: 61 ctcacgcatcggaaggcagagaattttggagagtggtactctgaggtagtcgtgaatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctcacgcatcggaaggcagagaattttggagagtggtactctgaggtagtcgtgaatgcc 188
Query: 121 gaattgatcgagtactacgatatctctggctgctacattctcagaccatggtcaatttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaattgatcgagtactacgatatctctggctgctacattctcagaccatggtcaatttca 248
Query: 181 acctgggagatactacaaactttcttcgattcacaaatcaagaagatgaaggtcaagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 acctgggagatactacaaactttcttcgattcacaaatcaagaagatgaaggtcaagaac 308
Query: 241 tgctacttcccactgttcgtgaatcgcggtgttctggatcacgttgaggggttttcacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgctacttcccactgttcgtgaatcgcggtgttctggatcacgttgaggggttttcacca 368
Query: 301 gaggttgcttgggtaacaaaatccggtaaaactgtgttggagaatccaattgcaattcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaggttgcttgggtaacaaaatccggtaaaactgtgttggagaatccaattgcaattcgc 428
Query: 361 cctaccagtgaaactgtgatgtatccctatttctc 395
|||||||||||||||||||||||||||||||||||
Sbjct: 429 cctaccagtgaaactgtgatgtatccctatttctc 463
>gnl|LJGI|TC62134 homologue to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1037
Score = 361 bits (182), Expect = 8e-99
Identities = 346/400 (86%), Gaps = 3/400 (0%)
Strand = Plus / Plus
Query: 283 gttgaggggttttcaccagaggttgcttgggtaacaaaatccggtaaaactgtgttggag 342
|||||||| ||| | ||||||||||||||||| || || || || || ||| ||| ||
Sbjct: 435 gttgagggatttgctccagaggttgcttgggtgactaagtctggggaatctgagttagaa 494
Query: 343 aatccaattgcaattcgccctaccagtgaaactgtgatgtatccctatttctccaagtgg 402
| ||| ||||| |||||||| || |||||||| || ||||| ||||| | ||||||||||
Sbjct: 495 attcctattgctattcgcccaactagtgaaaccgttatgtacccctactactccaagtgg 554
Query: 403 attagagggcaccgtgatttgccaatgaaactgaatcagtggtgcagtgtggttagatgg 462
||||| ||||| ||||| |||||| ||||||| ||||||||||||| ||| |||||||||
Sbjct: 555 attagggggcatcgtgacttgccactgaaactcaatcagtggtgcaatgttgttagatgg 614
Query: 463 gag---agtaatcctatgccattcattcggagttgcgagtttctctggcaggaagggcac 519
||| || || || | |||||||| ||||| | |||||||| ||||||||||| |||
Sbjct: 615 gagttcagcaaccccacaccattcatcaggagtcgtgagtttctttggcaggaaggacac 674
Query: 520 tctgcttttgcaaccaaggaggaagcagatgctgaggttcttgagatactggaattgtat 579
||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||
Sbjct: 675 actgcttttgcaaccaaggaggaagcagatgcagaggttcttgagatattagaattatat 734
Query: 580 aggtgtatatatgaagagtatttggctgttcctgtcataaaggggaagaaaagtgagctt 639
||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||
Sbjct: 735 aggcgtatatatgaagagtatttggcagttcctgtcataaagggtaagaaaagtgcgctt 794
Query: 640 gagaagtttgctggtgcactttacactaccagtgttgagg 679
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 795 gagaagtttgctggtggactttacactaccagtgttgagg 834
Score = 256 bits (129), Expect = 4e-67
Identities = 168/181 (92%)
Strand = Plus / Plus
Query: 716 gtcgtggtatacaaggtgcaacttctcattgtctgggccaaaattttgctaagatgtttg 775
|||||||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 853 gtcgtggtgtacaaggagcaacttctcattgtctgggccaaaattttgctgaaatgtttg 912
Query: 776 agataaactttgaaaatgacaagggagagaaagcaatggtgtggcagaactcatgggcct 835
|||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||||||
Sbjct: 913 agattaactttgaaaatgagaagggagaaaaagcaatggcctggcaaaactcatgggcct 972
Query: 836 acagtactcgaactattggggtgatggttatggttcatggtgatgacaagggattggtgc 895
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 973 atagtactcgaacgattggggtgatggttatggttcatggtgatgacaagggattagtgc 1032
Query: 896 t 896
|
Sbjct: 1033 t 1033
>gnl|LJGI|BW596097 similar to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 473
Score = 161 bits (81), Expect = 2e-38
Identities = 108/117 (92%)
Strand = Plus / Plus
Query: 1238 ttgatgttgccaaacaaaagcgagatgaatgtgttcaggtcatacattcatgggatgagt 1297
||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1 ttgatgttgccaaacaaaaacgagatgaatgtattcagatcatacatacatgggatgagt 60
Query: 1298 ttgtacaagctttgaaccagagaaagatgatcttagcaccttggtgtgatgaggagg 1354
|| ||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatacaagctttgaatgaaaaaaagatgatcttagcaccttggtgtgatgaggagg 117
>gnl|LJGI|TC63029 homologue to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 715
Score = 131 bits (66), Expect = 1e-29
Identities = 203/248 (81%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 283 gttgaggggttttcaccagaggttgcttgggtaacaaaatccggtaaaactgtgttggag 342
|||||||| ||| | ||||||||||||||||| || || || || || ||| ||| ||
Sbjct: 468 gttgagggatttgctccagaggttgcttgggtgactaagtctggggaatctgagttagaa 527
Query: 343 aatccaattgcaattcgccctaccagtgaaactgtgatgtatccctatttctccaagtgg 402
| ||| ||||| |||||||| || |||||||| || ||||| ||||| | ||||||||||
Sbjct: 528 attcctattgctattcgcccaactagtgaaaccgttatgtacccctactactccaagtgg 587
Query: 403 attagagggcaccgtgatttgccaatgaaactgaatcagtggtgcagtgtggttagatgg 462
||||| ||||| ||||| |||||| ||||||| ||||||||||||| ||| |||||||||
Sbjct: 588 attagggggcatcgtgacttgccactgaaactcaatcagtggtgcaatgttgttagatgg 647
Query: 463 gag---agtaatcctatgccattcattcggagttgcgagtttctctggcaggaagggcac 519
||| || || || | |||||||| ||||| | |||||||| ||||||||||| |||
Sbjct: 648 gagttcagcaaccccacaccattcatcaggagtcgtgagtttctttggcaggaaggacac 707
Query: 520 tctgcttt 527
|||||||
Sbjct: 708 actgcttt 715