Miyakogusa Predicted Gene
- Lj2g3v1280050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1280050.1 Non Chatacterized Hit- tr|I1KXS9|I1KXS9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19749 PE,88.27,0,Cullin
repeat-like,Cullin repeat-like-containing domain; Cullin homology
domain,Cullin homology; no ,CUFF.36697.1
(2004 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76803 similar to UniRef100_A7QEF5 Cluster: Chromosome... 1189 0.0
gnl|LJGI|AW719682 similar to UniRef100_A7QEF5 Cluster: Chromosom... 936 0.0
gnl|LJGI|BW633003 similar to UniRef100_Q711G4 Cluster: Cullin 3B... 159 8e-38
gnl|LJGI|DC598281 similar to UniRef100_A7QEF5 Cluster: Chromosom... 82 2e-14
>gnl|LJGI|TC76803 similar to UniRef100_A7QEF5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 971
Score = 1189 bits (600), Expect = 0.0
Identities = 612/616 (99%)
Strand = Plus / Plus
Query: 1379 aattagagggcatgtttactgacatgagaacctctgtagacacaatgcaaggcttttatg 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattagagggcatgtttactgacatgagaacctctgtagacacaatgcaaggcttttatg 60
Query: 1439 ccagccaccctgagttaggcgatggccctacacttactgtgcaggttttaacaacagggt 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccagccaccctgagttaggcgatggccctacacttactgtgcaggttttaacaacagggt 120
Query: 1499 cttggccaactcaatctagcttgacatgtaacctgccagctgaaatgtccgcactttgtg 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttggccaactcaatctagcttgacatgtaacctgccagctgaaatgtccgcactttgtg 180
Query: 1559 agaagtttcggtcatattacctcggcacccacactggcaggagattgacctggcaaacta 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaagtttcggtcatattacctcggcacccacactggcaggagattgacctggcaaacta 240
Query: 1619 acatgggcacagcagacttaaaagctacctttggaaaaggtcaaagacatgagctaaatg 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatgggcacagcagacttaaaagctacctttggaaaaggtcaaagacatgagctaaatg 300
Query: 1679 tctccacctaccaaatgtgtgtcctcatgctgttcaacaatgctgagagactaacctaca 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctccacctaccaaatgtgtgtcctcatgctgttcaacaatgctgagagactaacctaca 360
Query: 1739 aggaaattgagcaagcaactgagattcctgcttcagatctgaagaggtgcctgcaatcat 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggaaattgagcaagcaactgagattcctgcttcagatctgaagaggtgcctgcaatcat 420
Query: 1799 tggctttggttaagggaagaaatgttctgaggaaggagcctatgagcaaggatgttggtg 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggctttggttaagggaagaaatgttctgaggaaggagcctatgagcaaggatgttggtg 480
Query: 1859 aagatgatgcattctttgttaatgacaagatcagtagtaaactgtacaaggtgaaaatag 1918
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 aggatgatgcattctttgttaatgacaagttcagtagtaaactgtacaaggtgaaaatag 540
Query: 1919 gaactgtagttgaacaaaaggaatcagaacctgagaaactggaaactcgacaaagagtgg 1978
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 541 gaactgtagttgcacaaaaggaatcagaacctgagaaactggaaactcgaccaagagtgg 600
Query: 1979 aggaggacaggaagcc 1994
||||||||||||||||
Sbjct: 601 aggaggacaggaagcc 616
>gnl|LJGI|AW719682 similar to UniRef100_A7QEF5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 480
Score = 936 bits (472), Expect = 0.0
Identities = 477/479 (99%)
Strand = Plus / Plus
Query: 914 gtgaagtgatgacttcacacatcagagagtctggtaaacagcttgttactgatccagaaa 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgaagtgatgacttcacacatcagagagtctggtaaacagcttgttactgatccagaaa 61
Query: 974 ggttgaaggaccctgttgaatttgtgcaaaggctcttagatgaaaaagataaatatgaca 1033
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 ggttgaaggaccctgttgaatttgtgcaaaggctcttacatgaaaaagataaatatgaca 121
Query: 1034 agattataaatttggcgtttaataatgacaagttattccagaatgctttgagttcctcat 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agattataaatttggcgtttaataatgacaagttattccagaatgctttgagttcctcat 181
Query: 1094 ttgaatacttcattaacttgaatcctcgttctccggagttcatttcactatttgttgatg 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttgaatacttcattaacttgaatcctcgttctccggagttcatttcactatttgttgatg 241
Query: 1154 ataagcttcgaaaaggtctgaagggggttagtgaggatgatatagagactactcttgaca 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataagcttcgaaaaggtctgaagggggttagtgaggatgatatagagactactcttgaca 301
Query: 1214 aggtgatgatgctattccggtacttgcaagaaaaagatgtgtttgagaagtattacaaac 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aggtgatgatgctattccggtacttgcaagaaaaagatgtgtttgagaagtattacaaac 361
Query: 1274 agcatctagcaaagcggcttttgtctggaaaaaccgtttctgatgatgcagagagaagtc 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agcatctagcaaagcggcttttgtctggaaaaaccgtttctgatgatgcagagagaagtc 421
Query: 1334 tcatagtcaagctcaagacagaatgcggttatcaatttacctctaaattagagggcatg 1392
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 422 tcatagtcaagctcaagacagaatgcggntatcaatttacctctaaattagagggcatg 480
>gnl|LJGI|BW633003 similar to UniRef100_Q711G4 Cluster: Cullin 3B; n=3; Arabidopsis
thaliana|Rep: Cullin 3B - Arabidopsis thaliana (Mouse-ear
cress), partial (24%)
Length = 446
Score = 159 bits (80), Expect = 8e-38
Identities = 347/436 (79%)
Strand = Plus / Plus
Query: 970 gaaaggttgaaggaccctgttgaatttgtgcaaaggctcttagatgaaaaagataaatat 1029
||||||||||| || ||||| || ||||||||| |||| || ||| || |||||||||
Sbjct: 11 gaaaggttgaaagatcctgtggattttgtgcaacggctattggatttgaaggataaatat 70
Query: 1030 gacaagattataaatttggcgtttaataatgacaagttattccagaatgctttgagttcc 1089
|||||||| || | | |||| ||||| ||||||||| ||| |||||||| |||| ||||
Sbjct: 71 gacaagatcattagtatggcatttaacaatgacaagacatttcagaatgccttgaattcc 130
Query: 1090 tcatttgaatacttcattaacttgaatcctcgttctccggagttcatttcactatttgtt 1149
|| ||||| | ||||| || |||||| |||| ||||| ||||||||||| | |||||
Sbjct: 131 tcttttgagcatttcatcaatttgaatgctcggtctcctgagttcatttctttgtttgtg 190
Query: 1150 gatgataagcttcgaaaaggtctgaagggggttagtgaggatgatatagagactactctt 1209
||||| || ||||| | |||| |||| ||||| ||||||| ||| || ||| || ||
Sbjct: 191 gatgacaaacttcgcagaggtttgaaaggggtaggtgaggaggatgtatagattatactg 250
Query: 1210 gacaaggtgatgatgctattccggtacttgcaagaaaaagatgtgtttgagaagtattac 1269
||||| || |||||||| ||||||| | | ||||| || ||| | |||||||||||||||
Sbjct: 251 gacaaagtcatgatgcttttccggttcctacaagagaaggatatctttgagaagtattac 310
Query: 1270 aaacagcatctagcaaagcggcttttgtctggaaaaaccgtttctgatgatgcagagaga 1329
|| || || ||||||| ||||| | || ||||| || || |||||||| ||||| |||
Sbjct: 311 aagcaacacttagcaaaaaggcttctttcaggaaagactgtgtctgatgaagcagaaaga 370
Query: 1330 agtctcatagtcaagctcaagacagaatgcggttatcaatttacctctaaattagagggc 1389
||| | || || |||||||| ||||| || || || |||||||| ||||| | ||| ||
Sbjct: 371 agtttgatcgttaagctcaaaacagagtgtggataccaatttacttctaagctggagagc 430
Query: 1390 atgtttactgacatga 1405
|||||||| |||||||
Sbjct: 431 atgtttacagacatga 446
>gnl|LJGI|DC598281 similar to UniRef100_A7QEF5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 565
Score = 81.8 bits (41), Expect = 2e-14
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 112 gagatatacaaccacaacgctagtggtctcagctttgaagagctttacaggaatgcatac 171
||||| || ||||| || ||||||||||| |||||||||||||||||| ||||||| ||
Sbjct: 177 gagatttataaccataatgctagtggtcttagctttgaagagctttaccggaatgcttat 236
Query: 172 aatatggttcttcacaaatgtggtgagaa 200
|||||||| || ||||||| ||| |||||
Sbjct: 237 aatatggtgctgcacaaatttggggagaa 265
Score = 69.9 bits (35), Expect = 6e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 322 aaggcattacaaatgattagagacattctgatgtacatggataggacttacgtaccaggc 381
||||||||||| ||||| | ||||| |||||||||||||| | |||||| ||||| ||
Sbjct: 387 aaggcattacagatgatccgggacatactgatgtacatggaccgaacttacataccaagc 446
Query: 382 aacaagaagacccctgtttatgaacttggcctgaatctctggagaga 428
||| | || ||||||||| || | ||||| ||||||||||||||||
Sbjct: 447 aaccataaaacccctgttcatcagcttggtttgaatctctggagaga 493