Miyakogusa Predicted Gene

Lj2g3v1119550.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1119550.1 Non Chatacterized Hit- tr|I1MEN1|I1MEN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57429
PE,81.03,0,GCD14,tRNA (adenine(58)-N(1))-methyltransferase catalytic
subunit GCD14; SUBFAMILY NOT NAMED,NULL; U,CUFF.36282.1
         (930 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72811 similar to UniRef100_A2Q516 Cluster: SAM (And s...  1144   0.0  

>gnl|LJGI|TC72811 similar to UniRef100_A2Q516 Cluster: SAM (And some other nucleotide)
            binding motif; n=1; Medicago truncatula|Rep: SAM (And
            some other nucleotide) binding motif - Medicago
            truncatula (Barrel medic), partial (95%)
          Length = 1280

 Score = 1144 bits (577), Expect = 0.0
 Identities = 840/930 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgttggccggcgatcctgcaaaaaggatatcatttaatcgatgtattaggaatggtgat 60
            ||||||||| ||||  |||||||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 207  atgttggccagcgaatctgcaaaaaggatatcgtttaatcgatctattagcaatggcgat 266

                                                                        
Query: 61   ttggttattgtttatgaaaggcatgatagcatgaaggctgtaacagttgctgaaggatca 120
            |||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||
Sbjct: 267  ttggttattgtttatgaaaggcatgacagcatgaaggctgtaacagtgactgaaggatca 326

                                                                        
Query: 121  gtgctgcagaatcgatttggcgttttcaaatattcggactggatagggaagccatttggg 180
            || ||||||||||| || || ||||||||| |||| || |||||||||||| ||||||||
Sbjct: 327  gttctgcagaatcgtttcggtgttttcaaacattcagattggatagggaagtcatttggg 386

                                                                        
Query: 181  tcaaaagtattcagcaacaagggtggttttgtgtacttgttagctcctacgccagaacta 240
            || ||||| ||||| || ||||| || |||||||||||||| ||||| || || ||||||
Sbjct: 387  tccaaagtgttcagtaataagggcggctttgtgtacttgttggctcccacaccggaacta 446

                                                                        
Query: 241  tggactcttgttttaagccacaggactcagattctatatattgcagacattagctttgtt 300
            |||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 447  tggactctagtgttaagccacaggactcagattctatacattgcagatattagctttgtt 506

                                                                        
Query: 301  gtcatgtacttggagattgttcctggttgtttggttcttgaatctggaactggaagtggt 360
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 507  gtcatgtacttggagattgttcctggctgtttggttcttgaatctggaactggaagtgga 566

                                                                        
Query: 361  tctttaactacttcacttgcaagggcagtagctcctgcaggacatgtgcatacatttgat 420
            ||||||||||| |||||||||||||||||||||||| ||||||||||  |||| ||||||
Sbjct: 567  tctttaactacgtcacttgcaagggcagtagctcctacaggacatgtctatacgtttgat 626

                                                                        
Query: 421  ttccacgagcaaagggctgcatcagctagggatgattttcagaggactggtctaagcaac 480
            ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 627  ttccacgagcaaagggctggatcagctagggatgattttgagaggactggtctaagcaag 686

                                                                        
Query: 481  ttagtcagggtgggagtgagggacattcagggtcagggatttcctgatgattttgctggc 540
            |||||||  |||||||||||||||||||||||| ||||||||||||| || |||||||||
Sbjct: 687  ttagtcactgtgggagtgagggacattcagggtgagggatttcctgaagaatttgctggc 746

                                                                        
Query: 541  ttggctgatgcagnnnnnnnagatctaccccagccttggctagctattccttcagctgcc 600
            | ||  |||||||        |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 747  tcggtggatgcagtttttttggatctaccccagccttggcttgctattccttcagctgca 806

                                                                        
Query: 601  aaaatgttaaaacaagatggcacgctttgctcgttctccccatgtattgaacaagtacaa 660
            ||||||||||||||||| | |||| | ||||| |||||||||||||| ||||||||||||
Sbjct: 807  aaaatgttaaaacaagacgccacgttgtgctcattctccccatgtatcgaacaagtacaa 866

                                                                        
Query: 661  cgatcatgtgaaacacttagaaccagcttcactgatataaggacttttgaggtgctccta 720
            |||||||||||||||||| ||||||||||||| |||||||||||||||||||| || |||
Sbjct: 867  cgatcatgtgaaacacttcgaaccagcttcaccgatataaggacttttgaggtacttcta 926

                                                                        
Query: 721  cgcacatatgaagttggagaagggaaaatggaaagattacaggagaatgggaaaggctct 780
            ||||||||||||||| |||||  ||| ||||||||||||||||||||||||||  |||||
Sbjct: 927  cgcacatatgaagttcgagaaacgaagatggaaagattacaggagaatgggaatagctct 986

                                                                        
Query: 781  aatggttcacttccttgtaagaggaggcagtgttcagatggaggctatgtgctcagcagt 840
            |||| ||||||||||||  |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 987  aatgtttcacttccttgccagaggaggcagtgttcagatggaggtaatgtgctcagcagt 1046

                                                                        
Query: 841  aatatttcttctgttgtagctaaaccttgcggtgaagctagaggtcacacaggctatttg 900
              |||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 1047 tctatttcttctgttacagctagaccatgcggtgaagctagaggtcacacaggctatttg 1106

                                          
Query: 901  acatttgcaaggcttaaatgtctctcatga 930
            |||||||| || ||||||||||| ||||||
Sbjct: 1107 acatttgccagacttaaatgtctatcatga 1136