Miyakogusa Predicted Gene

Lj2g3v1069420.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1069420.2 Non Chatacterized Hit- tr|C6TMK1|C6TMK1_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,82.05,0,Rad60-SLD_2,NULL; Ubiquitin-like,NULL; no
description,NULL,CUFF.36188.2
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP033435 similar to UniRef100_Q8LCS8 Cluster: Membrane-...   226   7e-59
gnl|LJGI|TC62347 weakly similar to UniRef100_Q8LCS8 Cluster: Mem...   190   4e-48
gnl|LJGI|TC82232 similar to UniRef100_Q8LCS8 Cluster: Membrane-a...   157   6e-38

>gnl|LJGI|BP033435 similar to UniRef100_Q8LCS8 Cluster: Membrane-anchored
           ubiquitin-fold protein 2; n=1; Arabidopsis thaliana|Rep:
           Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (35%)
          Length = 481

 Score =  226 bits (114), Expect = 7e-59
 Identities = 129/134 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggcggagagccaagatcaactagcgatcaagtttcgattgagtgacgggtcagatatt 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 465 atggcggagagccaagatcaactagagatcaagtttcgattgagtgacgggtcggatatt 406

                                                                       
Query: 61  ggccccaaaagttttgctgctgctactagaattacagcactgaaagaaagtattcttgcg 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 405 ggccccaaaagttttgctgctgctactagaattgcagcactgaaagaaagtattcttgct 346

                         
Query: 121 caatggccaaaaga 134
           |||||||| |||||
Sbjct: 345 caatggccgaaaga 332


>gnl|LJGI|TC62347 weakly similar to UniRef100_Q8LCS8 Cluster: Membrane-anchored
           ubiquitin-fold protein 2; n=1; Arabidopsis thaliana|Rep:
           Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (83%)
          Length = 1131

 Score =  190 bits (96), Expect = 4e-48
 Identities = 249/300 (83%)
 Strand = Plus / Plus

                                                                       
Query: 55  gatattggccccaaaagttttgctgctgctactagaattacagcactgaaagaaagtatt 114
           |||||||||||||||||||||||||| ||||| || ||| || |  | ||||||||||||
Sbjct: 380 gatattggccccaaaagttttgctgcagctacgagtattgcaactttaaaagaaagtatt 439

                                                                       
Query: 115 cttgcgcaatggccaaaagacaaggagtatggcccaaaaactgtaaaagatgtgaagtta 174
           ||||| || ||||| ||||| |||||| |||||||||  || ||||| ||| ||||||||
Sbjct: 440 cttgctcagtggccgaaagataaggagaatggcccaaggacagtaaaggatatgaagtta 499

                                                                       
Query: 175 attaatgcgggaaaaatattggagaacaacagaacagtgggggaatgccagagtccattg 234
           || | ||| ||||| || ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 500 ataagtgcaggaaagattttggataacaacagaacagttggggaatgccagagcccattg 559

                                                                       
Query: 235 tgtaatccccctggtggagtaacaactatgcttgtggttgtgcaaccaccaactgtggag 294
           ||| || | |||| |   || || || |||| |||||||||||||||||| |||   |||
Sbjct: 560 tgtgatgctcctgatactgttactacaatgcatgtggttgtgcaaccacctactacagag 619

                                                                       
Query: 295 aaagagaagaatgtagcaagtgaagcaaagcagagcaaatgtgtctgtgtcatattatag 354
           ||||||||||| |  ||||| ||| ||||||||| ||||||| | ||||| || ||||||
Sbjct: 620 aaagagaagaaagctgcaagcgaaacaaagcagaacaaatgtctgtgtgttattttatag 679


>gnl|LJGI|TC82232 similar to UniRef100_Q8LCS8 Cluster: Membrane-anchored
           ubiquitin-fold protein 2; n=1; Arabidopsis thaliana|Rep:
           Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (68%)
          Length = 773

 Score =  157 bits (79), Expect = 6e-38
 Identities = 157/183 (85%)
 Strand = Plus / Plus

                                                                       
Query: 55  gatattggccccaaaagttttgctgctgctactagaattacagcactgaaagaaagtatt 114
           |||||||||||||||||||||||||| ||||| || ||| || |  | ||||||||||||
Sbjct: 554 gatattggccccaaaagttttgctgcagctacgagtattgcaactttaaaagaaagtatt 613

                                                                       
Query: 115 cttgcgcaatggccaaaagacaaggagtatggcccaaaaactgtaaaagatgtgaagtta 174
           ||||| || ||||| ||||| |||||| |||||||||  || ||||| ||| ||||||||
Sbjct: 614 cttgctcagtggccgaaagataaggagaatggcccaaggacagtaaaggatatgaagtta 673

                                                                       
Query: 175 attaatgcgggaaaaatattggagaacaacagaacagtgggggaatgccagagtccattg 234
           || | ||| ||||| || ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 674 ataagtgcaggaaagattttggataacaacagaacagttggggaatgccagagcccattg 733

              
Query: 235 tgt 237
           |||
Sbjct: 734 tgt 736