Miyakogusa Predicted Gene
- Lj2g3v0889170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0889170.1 Non Chatacterized Hit- tr|I1J4H3|I1J4H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.879
PE=4,82.71,0,seg,NULL; no description,NULL; no description,Transferrin
receptor-like, dimerisation domain; Transf,CUFF.35694.1
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67439 similar to UniRef100_A7PEG0 Cluster: Chromosome... 1019 0.0
gnl|LJGI|FS360666 similar to UniRef100_A7PEG0 Cluster: Chromosom... 872 0.0
gnl|LJGI|TC82786 similar to UniRef100_A7PEG0 Cluster: Chromosome... 678 0.0
gnl|LJGI|TC81331 similar to UniRef100_A7PEG0 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC67439 similar to UniRef100_A7PEG0 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1012
Score = 1019 bits (514), Expect = 0.0
Identities = 611/642 (95%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 4 tatgaatcttggagtggttcaagtagttcccctctgattggaaggttaggaggtgcagga 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 18 tatgaatcttggactggttcaagtagttcccctctgattggaaggttaggaggtggagga 77
Query: 64 tcagattacgcagcatttttgcagcatgtgggaattccagcagctgacatagcctttgga 123
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tcagattacgcagcttttttacagcatgtgggaattccagcagctgacatagcctttgga 137
Query: 124 ggggattctgcaacttacccagtataccactcattatatgatgatttcatctggatgcaa 183
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 138 ggggattctgcaagttacccagtataccactcaatatatgatgatttcatctggatgcag 197
Query: 184 aaattcggtgatcctatgtttcaacggcatgttgcagctgcaagtgtttggggtctagta 243
| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 198 atttt-ggtgatcctatgtttcaaaggcatgttgcagctgcaagtgtttggggtctagta 256
Query: 244 gcactttggttagcagatgaggaattcataccttttgattatgtttcctatgctaaggag 303
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcactttggctagcagatgaggaattcataccttttgattatgtttcctatgctaaggag 316
Query: 304 ctccagcttagcgttaaggtactggaaaatgagatttcaagcaaagacataaatttgact 363
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 317 ctccagcttagcgttaaggtactggaaaatgagatttcaaacaaagacataaatttgact 376
Query: 364 cctatgttcacctccatcaaggaacttgagaaagcagcaaccatgataaagaaccaaaga 423
||||| || || |||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 377 cctatatttactgccatcaaggagcttgagaaagcggcaaccatgataaagaaccagagg 436
Query: 424 aaggaattagcagcaagtaaaggatggacaacaaggaaggagaaccatttgaaagtgaga 483
|||||||| | |||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 437 aaggaatttgaagcaagtaaaggatggacaacaaggaaggagaacaatgtgaaagtgaga 496
Query: 484 gagttgaatgatagactgatgatggctgagcgtgcattcactgacagagatggtctgttt 543
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gagttgaacgatagactgatgatggctgagcgtgcattcactgacagagatggtctgttt 556
Query: 544 ggaatgtcctggtacaagcatttgatatatggacgatcgaaacacaatggttacggctcc 603
|||||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 557 ggaatgtcatggtataagcatttgatatatggacgatcgaaacacaatgtttatggctcc 616
Query: 604 caatctttccctggaattgatgatgcagtaataatagcaaaa 645
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 617 caatctttccctggaattgatgatgcagcaataatagcaaaa 658
>gnl|LJGI|FS360666 similar to UniRef100_A7PEG0 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 728
Score = 872 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Minus
Query: 206 aacggcatgttgcagctgcaagtgtttggggtctagtagcactttggttagcagatgagg 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aacggcatgttgcagctgcaagtgtttggggtctagtagcactttggttagcagatgagg 669
Query: 266 aattcataccttttgattatgtttcctatgctaaggagctccagcttagcgttaaggtac 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aattcataccttttgattatgtttcctatgctaaggagctccagcttagcgttaaggtac 609
Query: 326 tggaaaatgagatttcaagcaaagacataaatttgactcctatgttcacctccatcaagg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tggaaaatgagatttcaagcaaagacataaatttgactcctatgttcacctccatcaagg 549
Query: 386 aacttgagaaagcagcaaccatgataaagaaccaaagaaaggaattagcagcaagtaaag 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aacttgagaaagcagcaaccatgataaagaaccaaagaaaggaattagcagcaagtaaag 489
Query: 446 gatggacaacaaggaaggagaaccatttgaaagtgagagagttgaatgatagactgatga 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatggacaacaaggaaggagaaccatttgaaagtgagagagttgaatgatagactgatga 429
Query: 506 tggctgagcgtgcattcactgacagagatggtctgtttggaatgtcctggtacaagcatt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tggctgagcgtgcattcactgacagagatggtctgtttggaatgtcctggtacaagcatt 369
Query: 566 tgatatatggacgatcgaaacacaatggttacggctcccaatctttccctggaattgatg 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgatatatggacgatcgaaacacaatggttacggctcccaatctttccctggaattgatg 309
Query: 626 atgcagtaataatagcaaaa 645
||||||||||||||||||||
Sbjct: 308 atgcagtaataatagcaaaa 289
>gnl|LJGI|TC82786 similar to UniRef100_A7PEG0 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1031
Score = 678 bits (342), Expect = 0.0
Identities = 471/514 (91%)
Strand = Plus / Plus
Query: 132 tgcaacttacccagtataccactcattatatgatgatttcatctggatgcaaaaattcgg 191
||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 9 tgcaagttacccagtataccactcactatatgatgatttcatctggatgaaaaaattcgg 68
Query: 192 tgatcctatgtttcaacggcatgttgcagctgcaagtgtttggggtctagtagcactttg 251
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 69 tgatcctatgtttcaaaggcatgttgcagctgcaagtgtttggggtttagtagcactttg 128
Query: 252 gttagcagatgaggaattcataccttttgattatgtttcctatgctaaggagctccagct 311
| ||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 129 gctagcagatgagaaattcataccttttgattatgtatcctatgctaaggaacttcagct 188
Query: 312 tagcgttaaggtactggaaaatgagatttcaagcaaagacataaatttgactcctatgtt 371
||||||| ||| |||| |||| |||||||||| |||||| |||||||||| |||||| ||
Sbjct: 189 tagcgttgaggaactgcaaaacgagatttcaaacaaagaaataaatttgattcctatatt 248
Query: 372 cacctccatcaaggaacttgagaaagcagcaaccatgataaagaaccaaagaaaggaatt 431
||| ||||| ||||| |||||||||||||||||| ||||||| ||||| |||||||||||
Sbjct: 249 cacgtccattaaggagcttgagaaagcagcaaccgtgataaataaccagagaaaggaatt 308
Query: 432 agcagcaagtaaaggatggacaacaaggaaggagaaccatttgaaagtgagagagttgaa 491
|| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 309 agaagcaagtaaaggatggacaacaaggaatgaggaccatttgaaagtgagagagctgaa 368
Query: 492 tgatagactgatgatggctgagcgtgcattcactgacagagatggtctgtttggaatgtc 551
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 369 cgatagactgatgatggctgagcgtgcattcactgacagagacggtctctttggaatgtc 428
Query: 552 ctggtacaagcatttgatatatggacgatcgaaacacaatggttacggctcccaatcttt 611
||||| || |||||||||||||||| ||| || || |||| ||| ||||||||||||||
Sbjct: 429 atggtataaacatttgatatatggaccatcaaagcataatgattatggctcccaatcttt 488
Query: 612 ccctggaattgatgatgcagtaataatagcaaaa 645
|||||||||||||||||| |||| ||| ||||||
Sbjct: 489 ccctggaattgatgatgctgtaaaaatggcaaaa 522
>gnl|LJGI|TC81331 similar to UniRef100_A7PEG0 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 495
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 430 ttagcagcaagtaaaggatggacaacaaggaaggagaaccatttgaaagtgagagagttg 489
|||| |||||||||||||||||| |||||||| ||| | |||||| || ||||| || ||
Sbjct: 1 ttagaagcaagtaaaggatggactacaaggaatgaggatcatttgcaaatgagatagctg 60
Query: 490 aat 492
|||
Sbjct: 61 aat 63