Miyakogusa Predicted Gene
- Lj2g3v0766450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0766450.1 CUFF.35368.1
(340 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78742 weakly similar to UniRef100_Q9IGT7 Cluster: 163... 333 4e-91
gnl|LJGI|BP036214 homologue to UniRef100_A9ERZ4 Cluster: Mechano... 289 6e-78
>gnl|LJGI|TC78742 weakly similar to UniRef100_Q9IGT7 Cluster: 163R*; n=1; Porcine
adenovirus 3|Rep: 163R* - Porcine adenovirus 3 (PAdV-3),
partial (13%)
Length = 1200
Score = 333 bits (168), Expect = 4e-91
Identities = 304/355 (85%), Gaps = 32/355 (9%)
Strand = Plus / Minus
Query: 1 atgaatttcccacccaatgtcaatgcaaaatgtcatataggattacaagtacaagtgtac 60
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1114 atgaatttgccacccaatgtcaatgcaaaatgtcatataggattacatgtacaagtgtac 1055
Query: 61 agacaccagcaaaattctactaatttaatcaaactccaactcaattcactatcagcacag 120
|||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 1054 agacaccagcaa----------------tcaat-tccaaatcaattcactatcagcacag 1012
Query: 121 aatcttgcttcaccccctaaaatcgtccaaatcttcattccactgtgtgctcaaacccct 180
|| ||||||||| | ||||||| ||||||| |||||||||||||||||||||||| ||||
Sbjct: 1011 aagcttgcttcatcacctaaaaccgtccaactcttcattccactgtgtgctcaaatccct 952
Query: 181 tcatactatatccacatatctacctcaacgaatagtagtagcagtacccattctttaaac 240
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 951 tcatactatatccacatatctacctcaatgaatagtagtagcagtacccatcctttaaac 892
Query: 241 tgtacaatgtcaacaattttacatatctccactactt---------------caccattc 285
|||||| |||||||| ||||||||||||||||||||| ||||||||
Sbjct: 891 tgtacagtgtcaacacttttacatatctccactacttcttctctgaactctgcaccattc 832
Query: 286 ttgaagttccagattacacccactgttgccacccatatcaaattcagagtttgag 340
|| |||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 831 ctggagttccagattaatcccactgttgccacccatatcaaagtcagagtttgag 777
>gnl|LJGI|BP036214 homologue to UniRef100_A9ERZ4 Cluster: Mechanosensitive ion channel
family protein; n=1; Phaeobacter gallaeciensis
2.10|Rep:, partial (1%)
Length = 409
Score = 289 bits (146), Expect = 6e-78
Identities = 235/267 (88%), Gaps = 17/267 (6%)
Strand = Plus / Plus
Query: 1 atgaatttcccacccaatgtcaatgcaaaatgtcatataggattacaagtacaagtgtac 60
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 160 atgaatttgccacccaatgtcaatgcaaaatgtcatataggattacatgtacaagtgtac 219
Query: 61 agacaccagcaaaattctactaatttaatcaaactccaactcaattcactatcagcacag 120
|||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 220 agacaccagcaa----------------tcaat-tccaaatcaattcactatcagcacag 262
Query: 121 aatcttgcttcaccccctaaaatcgtccaaatcttcattccactgtgtgctcaaacccct 180
|| ||||||||| | ||||||| ||||||| |||||||||||||| ||||||||| ||||
Sbjct: 263 aagcttgcttcatcacctaaaaccgtccaactcttcattccactgggtgctcaaatccct 322
Query: 181 tcatactatatccacatatctacctcaacgaatagtagtagcagtacccattctttaaac 240
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 323 tcatactatatccacatatctacctcaatgaatagtagtagcagtacccatcctttaaac 382
Query: 241 tgtacaatgtcaacaattttacatatc 267
|||||| |||||||| |||||||||||
Sbjct: 383 tgtacagtgtcaacacttttacatatc 409