Miyakogusa Predicted Gene
- Lj2g3v0718110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0718110.1 Non Chatacterized Hit- tr|B6TLV9|B6TLV9_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,37.14,0.027,seg,NULL,gene.g39837.t1.1
(502 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73459 similar to UniRef100_A7PGW5 Cluster: Chromosome... 850 0.0
gnl|LJGI|TC62217 similar to UniRef100_A7PGW5 Cluster: Chromosome... 64 9e-10
>gnl|LJGI|TC73459 similar to UniRef100_A7PGW5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 679
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Minus
Query: 1 atgagtagtgaacttcctggcaaaaaggtgacaaatattggtgaccattccattgtactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atgagtagtgaacttcctggcaaaaaggtgacaaatattggtgaccattccattgtactc 370
Query: 61 gcaagtggttccatttccatgcctcaacctctccaaaaactcaacagtaacatcagtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcaagtggttccatttccatgcctcaacctctccaaaaactcaacagtaacatcagtcct 310
Query: 121 aatatacttggaaggatgaggtcccccctttgtccaatcaacccaagtcagagtcctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aatatacttggaaggatgaggtcccccctttgtccaatcaacccaagtcagagtcctatt 250
Query: 181 agaattcctcttccaaaacttaatgttgaccaatgtaggcaagtaatgctcatcactgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agaattcctcttccaaaacttaatgttgaccaatgtaggcaagtaatgctcatcactgta 190
Query: 241 acattgaggattgcagtacttctcgaacacggggaaataacggcggtcggagactacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acattgaggattgcagtacttctcgaacacggggaaataacggcggtcggagactacttg 130
Query: 301 gagcgcgagggcgcggtcgatttggaaccactgggagccttttcgccactgggagagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gagcgcgagggcgcggtcgatttggaaccactgggagccttttcgccactgggagagttt 70
Query: 361 gatgaggggcttcattttggggttgtatcttccgcgccccacgttgcccgggagatcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gatgaggggcttcattttggggttgtatcttccgcgccccacgttgcccgggagatcata 10
Query: 421 ggcctcgac 429
|||||||||
Sbjct: 9 ggcctcgac 1
>gnl|LJGI|TC62217 similar to UniRef100_A7PGW5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1156
Score = 63.9 bits (32), Expect = 9e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 439 ggtggaattcatgaggtaggtgtagatggtggagaagttgaagagagggatgcaggattc 498
|||||| ||||| | ||| | |||||| || ||||||||||||||||| |||||||||||
Sbjct: 593 ggtggagttcattaagtaagagtagattgttgagaagttgaagagaggtatgcaggattc 534
Query: 499 tgat 502
||||
Sbjct: 533 tgat 530