Miyakogusa Predicted Gene
- Lj1g3v5061020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5061020.1 Non Chatacterized Hit- tr|I1NAR4|I1NAR4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8716 PE=,46,0.054,FAMILY
NOT NAMED,NULL; B3 DNA binding domain,B3 DNA binding domain; B3,B3 DNA
binding domain; DNA-bi,NODE_51460_length_1572_cov_15.260179.path1.1
(1293 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828503 similar to UniRef100_A7QJ19 Cluster: Chromosom... 844 0.0
gnl|LJGI|FS351831 UniRef100_Q6DT80 Cluster: AT1G01030; n=1; Arab... 400 e-111
gnl|LJGI|DC596118 similar to UniRef100_A7QJ19 Cluster: Chromosom... 184 9e-46
gnl|LJGI|TC72821 similar to UniRef100_A7QJ19 Cluster: Chromosome... 76 6e-13
gnl|LJGI|TC76835 similar to UniRef100_Q45EZ4 Cluster: RAV-like D... 70 4e-11
gnl|LJGI|AV412541 homologue to UniRef100_Q4G3H5 Cluster: RAV tra... 68 1e-10
gnl|LJGI|TC67138 similar to UniRef100_Q45EZ4 Cluster: RAV-like D... 56 6e-07
>gnl|LJGI|CB828503 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 487
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Minus
Query: 95 cagatgccacttacaattcatcatctggattagggttacaccagcaacaagatgctgcag 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cagatgccacttacaattcatcatctggattagggttacaccagcaacaagatgctgcag 367
Query: 155 cagcagtttctaatttcaccaatcgcaggaatcagcaactagacttgatggacttgacac 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cagcagtttctaatttcaccaatcgcaggaatcagcaactagacttgatggacttgacac 307
Query: 215 ttggaagccacaaccacacggaattagaggaacatggatcaggatcaggatcaagagaaa 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttggaagccacaaccacacggaattagaggaacatggatcaggatcaggatcaagagaaa 247
Query: 275 gagatcaggtggtggtggagaaggagcacatgtttgacaaagtggtgacgccaagcgatg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gagatcaggtggtggtggagaaggagcacatgtttgacaaagtggtgacgccaagcgatg 187
Query: 335 tggggaagctgaacaggctggtgatcccaaagcagcatgcggagaagtactttcctctgg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tggggaagctgaacaggctggtgatcccaaagcagcatgcggagaagtactttcctctgg 127
Query: 395 actcctcatccaacgagaaaggccttctcctcaatttcgaggaccgcaacgggaagctgt 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 actcctcatccaacgagaaaggccttctcctcaatttcgaggaccgcaacgggaagctgt 67
Query: 455 ggcgtttcaggtactcttactggaacagcagccagagctatgtgatgaccaaaggatgga 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ggcgtttcaggtactcttactggaacagcagccagagctatgtgatgaccaaaggatgga 7
Query: 515 gccgtt 520
||||||
Sbjct: 6 gccgtt 1
>gnl|LJGI|FS351831 UniRef100_Q6DT80 Cluster: AT1G01030; n=1; Arabidopsis lyrata subsp.
petraea|Rep: AT1G01030 - Arabidopsis lyrata subsp.
petraea (Northern rock-cress) (Cardaminopsispetraea),
partial (6%)
Length = 418
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Minus
Query: 1092 gaaacgcctaaggctatttggtgtgaacatggaatgtgcttcttcttcttcttcggcggc 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gaaacgcctaaggctatttggtgtgaacatggaatgtgcttcttcttcttcttcggcggc 359
Query: 1152 agatcaagaacatgtcagcagtacaatgccccttcttcagcgccgtgaagatccactttc 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agatcaagaacatgtcagcagtacaatgccccttcttcagcgccgtgaagatccactttc 299
Query: 1212 attatcatcatcagcaaggtttggggatcagagagggggaatgtttgatttggatccctc 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 attatcatcatcagcaaggtttggggatcagagagggggaatgtttgatttggatccctc 239
Query: 1272 tttgcagtatcgccagtgaatc 1293
||||||||||||||||||||||
Sbjct: 238 tttgcagtatcgccagtgaatc 217
>gnl|LJGI|DC596118 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 567
Score = 184 bits (93), Expect = 9e-46
Identities = 171/197 (86%)
Strand = Plus / Plus
Query: 424 ctcaatttcgaggaccgcaacgggaagctgtggcgtttcaggtactcttactggaacagc 483
||||||||||||||||| || |||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 1 ctcaatttcgaggaccggaatgggaagctctggcggttccggtactcgtactggaacagc 60
Query: 484 agccagagctatgtgatgaccaaaggatggagccgtttcgtcaaggataagaagcttgat 543
|||||||||||||||||||| |||||||||||||| || || ||||| ||||||||||||
Sbjct: 61 agccagagctatgtgatgacaaaaggatggagccggtttgtgaaggagaagaagcttgat 120
Query: 544 gcaggtgacattgtctccttccaacgaggactcggtgatctttacagacacaggttgtac 603
|| || ||||||||||| ||||| || || |||| || | | | | ||||||||||||
Sbjct: 121 gccggcgacattgtctcgttccagcgcggtgtcggggacttatgccggcacaggttgtac 180
Query: 604 attgattggaggagaag 620
|| ||||||||||||||
Sbjct: 181 atagattggaggagaag 197
>gnl|LJGI|TC72821 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 622
Score = 75.8 bits (38), Expect = 6e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1100 taaggctatttggtgtgaacatggaatgtgcttcttcttcttcttc 1145
||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 56 taaggctatttggggtgaacatggaatgtgcttcttcttcatcttc 101
>gnl|LJGI|TC76835 similar to UniRef100_Q45EZ4 Cluster: RAV-like DNA-binding protein;
n=1; Glycine max|Rep: RAV-like DNA-binding protein -
Glycine max (Soybean), partial (35%)
Length = 735
Score = 69.9 bits (35), Expect = 4e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 466 tactcttactggaacagcagccagagctatgtgatgaccaaaggatggagccgtttcgtc 525
|||||||| |||||||| |||||||||||||| |||||||||||||||| || || ||
Sbjct: 97 tactcttattggaacagtagccagagctatgttttgaccaaaggatggagtcggtttgtg 156
Query: 526 aaggataagaa 536
||||| |||||
Sbjct: 157 aaggagaagaa 167
>gnl|LJGI|AV412541 homologue to UniRef100_Q4G3H5 Cluster: RAV transcription factor;
n=1; Capsicum annuum|Rep: RAV transcription factor -
Capsicum annuum (Bell pepper), partial (16%)
Length = 304
Score = 67.9 bits (34), Expect = 1e-10
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 328 agcgatgtggggaagctgaacaggctggtgatcccaaagcagcatgcggagaagtacttt 387
|||||||| |||||||||||| | ||||||| || |||||||||||||||||| |||||
Sbjct: 199 agcgatgtagggaagctgaaccgtttggtgataccgaagcagcatgcggagaagcacttt 258
Query: 388 cc 389
||
Sbjct: 259 cc 260
>gnl|LJGI|TC67138 similar to UniRef100_Q45EZ4 Cluster: RAV-like DNA-binding protein;
n=1; Glycine max|Rep: RAV-like DNA-binding protein -
Glycine max (Soybean), partial (29%)
Length = 703
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 463 aggtactcttactggaacagcagccagagctatgtgatgaccaaaggatggagccgtttc 522
|||||||| || ||||| || ||||||||||| ||| | |||||||| |||||||| |||
Sbjct: 4 aggtactcgtattggaatagtagccagagctacgtgcttaccaaagggtggagccggttc 63
Query: 523 gtcaagga 530
|| |||||
Sbjct: 64 gttaagga 71