Miyakogusa Predicted Gene
- Lj1g3v4998360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4998360.1 Non Chatacterized Hit- tr|K3ZJU5|K3ZJU5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026850,60.76,1e-18,SSXT,SSXT; seg,NULL; SYNOVIAL SARCOMA
ASSOCIATED SS18 PROTEIN,SSXT,CUFF.33788.1
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66497 similar to UniRef100_A7QVR7 Cluster: Chromosome... 1304 0.0
gnl|LJGI|GO025971 similar to UniRef100_A7QVN6 Cluster: Chromosom... 1066 0.0
gnl|LJGI|FS325485 similar to UniRef100_A7QVN6 Cluster: Chromosom... 305 2e-82
>gnl|LJGI|TC66497 similar to UniRef100_A7QVR7 Cluster: Chromosome chr7 scaffold_192,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr7 scaffold_192, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1288
Score = 1304 bits (658), Expect = 0.0
Identities = 664/666 (99%)
Strand = Plus / Plus
Query: 1 atgcagcagcacctgatgcagatgcagcccatgatggctgcctactaccccaacaacgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atgcagcagcacctgatgcagatgcagcccatgatggctgcctactaccccaacaacgtc 292
Query: 61 accactgatcacattcagcagtatctggatgagaacaaatccttaattctgaagattgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 accactgatcacattcagcagtatctggatgagaacaaatccttaattctgaagattgtc 352
Query: 121 gaaagccagaattctggcaagctgaccgagtgtgccgagaaccaagcaaggctacagaga 180
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 353 gaaagccagaattctggtaagctgaccgagtgtgccgagtaccaagcaaggctacagaga 412
Query: 181 aatctcatgtaccttgctgcaatagctgactctcaaccccaaccacctaacatgcctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aatctcatgtaccttgctgcaatagctgactctcaaccccaaccacctaacatgcctggc 472
Query: 241 cagtacccttctggtggcatgatgcagcagggagcacactacatgcaggctcagcaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cagtacccttctggtggcatgatgcagcagggagcacactacatgcaggctcagcaggca 532
Query: 301 cagcagatgacacaacaacagctaatggctgcaaggtcctcccttttgtattcacagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cagcagatgacacaacaacagctaatggctgcaaggtcctcccttttgtattcacagcaa 592
Query: 361 ccatactcatcacttcaacagcagcaacaagctttgcaaacccaacttggtgtgagttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccatactcatcacttcaacagcagcaacaagctttgcaaacccaacttggtgtgagttca 652
Query: 421 ggtggaagtcaaggacttcacatgctgcaaagtgaagccagtaatgtcaatgtaggaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggtggaagtcaaggacttcacatgctgcaaagtgaagccagtaatgtcaatgtaggaggc 712
Query: 481 agtgcctccatgggttctggagggttccctgacttcatccgtggcgagggtttgcacggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 agtgcctccatgggttctggagggttccctgacttcatccgtggcgagggtttgcacggc 772
Query: 541 ggtggtggcagaggtcttattggaagtagcaagcaggacatggggggatcagatggcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ggtggtggcagaggtcttattggaagtagcaagcaggacatggggggatcagatggcaga 832
Query: 601 ggtggaagctctggtgaagggggtgaaaacctctacctgaaatctgctgatgatggaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ggtggaagctctggtgaagggggtgaaaacctctacctgaaatctgctgatgatggaaac 892
Query: 661 tagccg 666
||||||
Sbjct: 893 tagccg 898
>gnl|LJGI|GO025971 similar to UniRef100_A7QVN6 Cluster: Chromosome chr14 scaffold_190,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_190, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 688
Score = 1066 bits (538), Expect = 0.0
Identities = 548/550 (99%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 48 ccccaacaacgtcaccactgatcacattcagcagtatctggatgagaacaaatccttaat 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ccccaacaacgtcaccactgatcacattcagcagtatctggatgagaacaaatccttaat 199
Query: 108 tctgaagattgtcgaaagccagaattctggcaagctgaccgagtgtgccgagaaccaagc 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctgaagattgtcgaaagccagaattctggcaagctgaccgagtgtgccgagaaccaagc 259
Query: 168 aaggctacagagaaatctcatgtaccttgctgcaatagctgactctcaaccccaaccacc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaggctacagagaaatctcatgtaccttgctgcaatagctgactctcaaccccaaccacc 319
Query: 228 taacatgcctggccagtacccttctggtggcatgatgcagcagggagcacactacatgca 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caacatgcctggccagtacccttctggtggcatgatgcagcagggagcacactacatgca 379
Query: 288 ggctcagcaggcacagcagatgacacaacaacagctaatggctgcaaggtcctccctttt 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggctcagcaggcacagcagatgacacaacaacagctaatggctgcaaggtcctccctttt 439
Query: 348 gtattcacagcaaccatactcatcacttcaacagcagcaacaagctttgcaaacccaact 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtattcacagcaaccatactcatcacttcaacagcagcaacaagctttgcaaacccaact 499
Query: 408 tggtgtgagttcaggtggaagtcaaggacttcacatgctgcaaagtgaagccagtaatgt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggtgtgagttcaggtggaagtcaaggacttcacatgctgcaaagtgaagccagtaatgt 559
Query: 468 caatgtaggaggcagtgcctccatgggttctggagggttccctgacttcatccgtggcga 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caatgtaggaggcagtgcctccatgggttctggagggttccctgacttcatccgtggcga 619
Query: 528 gggtttgcacggcggtggtggcagaggtcttattggaagtagcaagcaggacatgggggg 587
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 620 gggtttgcacggcggtggtggcagaggtcttattggaagtagcaagca-gacatgggggg 678
Query: 588 atcagatggc 597
||||||||||
Sbjct: 679 atcagatggc 688
>gnl|LJGI|FS325485 similar to UniRef100_A7QVN6 Cluster: Chromosome chr14 scaffold_190,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_190, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 824
Score = 305 bits (154), Expect = 2e-82
Identities = 225/248 (90%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 1 atgcagcagcacctgatgcagatgcagcccatgatggctgcctactaccccaac---aac 57
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct: 323 atgcagcagcacctgatgcagatgcagcccatgatggcatcctactacaccaacaacaac 382
Query: 58 gtcaccactgatcacattcagcagtatctggatgagaacaaatccttaattctgaagatt 117
|||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 383 gtcacctctgatcacattcaacagtacctggatgagaacaagtccttaattctgaagatt 442
Query: 118 gtcgaaagccagaattctggcaagctgaccgagtgtgccgagaaccaagcaaggctacag 177
|| ||||||||||| ||||| ||||||| ||||||||| ||||| ||| ||||||| |||
Sbjct: 443 gttgaaagccagaactctgggaagctgagcgagtgtgctgagaatcaatcaaggctccag 502
Query: 178 agaaatctcatgtaccttgctgcaatagctgactctcaaccccaaccacctaacatgcct 237
||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 503 agaaatctcatgtacctggctgcaatagctgattctcaaccccaaccacccaccatgcct 562
Query: 238 ggccagta 245
|| |||||
Sbjct: 563 ggtcagta 570