Miyakogusa Predicted Gene
- Lj1g3v4914260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4914260.1 Non Chatacterized Hit- tr|I1NB36|I1NB36_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,92.9,0,zinc
finger,Zinc finger, C2H2-like; C2H2 and C2HC zinc fingers,NULL;
ZINC_FINGER_C2H2_1,Zinc finger,,CUFF.33560.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 141 5e-33
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 111 5e-24
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 86 3e-16
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 82 4e-15
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 76 3e-13
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 72 4e-12
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 68 6e-11
gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finge... 54 9e-07
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 141 bits (71), Expect = 5e-33
Identities = 215/263 (81%)
Strand = Plus / Plus
Query: 31 tgcaacaaagggtttcagagggatcaaaaccttcagttgcaccgaagaggtcacaatctt 90
||||||||||||||||||||||| || || || ||| | ||||| ||||||||||||||
Sbjct: 290 tgcaacaaagggtttcagagggaccagaatctgcagcttcaccggagaggtcacaatctg 349
Query: 91 ccttggaagctcaagcaaagaacaagtaatgaggtgaagaaacgggtgtatgtgtgccct 150
|| |||||||| | ||| || || || || ||||||| ||| |||||||||| |||||
Sbjct: 350 ccatggaagctgaggcagaggacgagcaaggaggtgaggaagagggtgtatgtctgcccg 409
Query: 151 gagccatcatgcgtccaccataaccctgctcgtgcattaggagacctcactggcataaaa 210
|| ||| | || ||||||||| ||||| |||| || || || || ||||| || || |||
Sbjct: 410 gaaccaacgtgtgtccaccatgacccttctcgagcgttgggtgatctcaccggaattaaa 469
Query: 211 aagcactacagccgcaaacatggtgagaagaaatggaaatgtgacaagtgctccaaaaga 270
||||||| | || | || || ||||||||||| |||||||| || || |||||||| | |
Sbjct: 470 aagcacttctgcagaaagcacggtgagaagaagtggaaatgcgagaaatgctccaagaaa 529
Query: 271 tatgcagtccaatctgattggaa 293
|||||||| ||||||||||||||
Sbjct: 530 tatgcagttcaatctgattggaa 552
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 111 bits (56), Expect = 5e-24
Identities = 290/368 (78%)
Strand = Plus / Plus
Query: 22 tgtgagatctgcaacaaagggtttcagagggatcaaaaccttcagttgcaccgaagaggt 81
|||||||||||||||||||| ||||| || || |||||||| || | || || ||||
Sbjct: 535 tgtgagatctgcaacaaaggctttcaaagagaccaaaacctccaacttcatcggcgaggc 594
Query: 82 cacaatcttccttggaagctcaagcaaagaacaagtaatgaggtgaagaaacgggtgtat 141
||||| || || |||||||| ||||||||||| | ||||| ||| ||||| ||
Sbjct: 595 cacaacctgccgtggaagctgaagcaaagaaccaccgcagaggttcggaagcgggtctac 654
Query: 142 gtgtgccctgagccatcatgcgtccaccataaccctgctcgtgcattaggagacctcact 201
|| || ||||| || ||||| |||||||| | ||| || | ||| | || |||||||||
Sbjct: 655 gtctgtcctgaaccttcatgtgtccaccacagcccggcaagagcactgggcgacctcact 714
Query: 202 ggcataaaaaagcactacagccgcaaacatggtgagaagaaatggaaatgtgacaagtgc 261
||||| || ||||||| | || | || || || ||||| |||||||||||||||||||||
Sbjct: 715 ggcattaagaagcacttctgcagaaagcacggcgagaaaaaatggaaatgtgacaagtgc 774
Query: 262 tccaaaagatatgcagtccaatctgattggaaggcccaccagaaaacatgtggtactagg 321
||||| | || || || |||||||| |||| || ||| |||| |||||| || | |
Sbjct: 775 tccaagaagtacgctgttcaatctgactggagagcacactccaaaatatgtggcacgaag 834
Query: 322 gagtacaaatgtgattgtggaaccatattttccaggagagacagttttatcacccacaga 381
|| || || ||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||
Sbjct: 835 gaatataagtgtgactgtggaaccatcttttccagaagagatagtttcatcacccacaga 894
Query: 382 gcattctg 389
|| |||||
Sbjct: 895 gctttctg 902
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 85.7 bits (43), Expect = 3e-16
Identities = 151/187 (80%)
Strand = Plus / Plus
Query: 31 tgcaacaaagggtttcagagggatcaaaaccttcagttgcaccgaagaggtcacaatctt 90
||||||||||||||||||||||| || || || ||| | ||||| ||||||||||||||
Sbjct: 310 tgcaacaaagggtttcagagggaccagaatctgcagcttcaccggagaggtcacaatctg 369
Query: 91 ccttggaagctcaagcaaagaacaagtaatgaggtgaagaaacgggtgtatgtgtgccct 150
|| |||||||| | ||| || || || || ||||||| ||| |||||||||| |||||
Sbjct: 370 ccatggaagctgaggcagaggacgagcaaggaggtgaggaagagggtgtatgtctgcccg 429
Query: 151 gagccatcatgcgtccaccataaccctgctcgtgcattaggagacctcactggcataaaa 210
|| ||| | | ||||||||| ||||| |||| || || || || ||||| || || |||
Sbjct: 430 gaaccaacgcgtgtccaccatgacccttctcgagcgttgggtgatctcaccggaattaaa 489
Query: 211 aagcact 217
|||||||
Sbjct: 490 aagcact 496
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 193 gacctcactggcataaaaaagcactacagccgcaaacatggtgagaagaaatggaaatgt 252
|||||||| ||||| || ||||||| |||| | || || ||||||||||| ||||| |||
Sbjct: 273 gacctcaccggcatcaagaagcacttcagcagaaagcacggtgagaagaagtggaagtgt 214
Query: 253 gacaagtgctccaaaagatatgcagtccaatctgattggaaggcccaccagaaaacatgt 312
|| ||||||||||| | ||| ||||||| ||| |||||||| || ||| |||||||
Sbjct: 213 gagaagtgctccaagaaatacgcagtcccatcagattggaaagctcacacccaaacatgc 154
Query: 313 ggtactagggagtacaaatgtgattgtgg 341
|| || ||||||||||| ||||| |||||
Sbjct: 153 ggcaccagggagtacaagtgtgactgtgg 125
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 75.8 bits (38), Expect = 3e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 229 catggtgagaagaaatggaaatgtgacaagtgctccaaaagatatgcagtccaatctgat 288
|||||||||||||| ||||||||||| ||||||||||| | |||||||| ||||| ||
Sbjct: 18 catggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttcaatcagac 77
Query: 289 tggaaggcccaccagaaaacatgtggtactagggagtacaaatgtgattgtgga 342
||||| || ||| ||||| |||||||| || || |||| |||||| ||||||
Sbjct: 78 tggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgga 131
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 226 aaacatggtgagaagaaatggaaatgtgacaagtgctccaaaagatatgcagtccaatct 285
|||||||| |||||||| |||||||||||||||||||| || | |||||| || |||||
Sbjct: 422 aaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttcaatcg 481
Query: 286 gattggaa 293
||||||||
Sbjct: 482 gattggaa 489
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 67.9 bits (34), Expect = 6e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 226 aaacatggtgagaagaaatggaaatgtgacaagtgctccaaaagatatgcagtccaatct 285
||||||||||||||||| ||||| ||||| ||||||||||| | ||| || || || ||
Sbjct: 365 aaacatggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgctgttcattcc 424
Query: 286 gattggaaggccca 299
||||||||||||||
Sbjct: 425 gattggaaggccca 438
Score = 54.0 bits (27), Expect = 9e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 16 ttcctctgtgagatctgcaacaaagggtttcagagggatcaaaaccttcagttgcaccga 75
|||||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |||| ||
Sbjct: 152 ttcctctgcgaaatctgtaacaaggggttccagagagaccagaacctgcagctgcatcgg 211
Query: 76 agaggtcacaatcttccttggaagctcaagcaaag 110
|||| ||||| || ||||||||||| ||||||||
Sbjct: 212 cgaggacacaacctgccttggaagctgaagcaaag 246
>gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (17%)
Length = 805
Score = 54.0 bits (27), Expect = 9e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 1 atggcaacaaatagattcctctgtgagatctgcaacaaagggtttcagagggatcaaaac 60
||||||||||| || ||| | |||||||||||||||||||| || || || ||||| ||
Sbjct: 698 atggcaacaaacaggttcttatgtgagatctgcaacaaaggattccaaagagatcagaat 757
Query: 61 cttcagttgcaccgaagaggtcacaat 87
|||||| | || ||||||| ||||||
Sbjct: 758 cttcagcttcatagaagagggcacaat 784