Miyakogusa Predicted Gene
- Lj1g3v4898010.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4898010.2 Non Chatacterized Hit- tr|H2MUX6|H2MUX6_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=WDR89
PE,31.17,3e-18,WD40,WD40 repeat; WD40
repeat-like,WD40-repeat-containing domain; WD_REPEATS_2,WD40 repeat;
WD_REPEA,CUFF.33544.2
(852 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023748 similar to UniRef100_A7Q0A9 Cluster: Chromosom... 1332 0.0
gnl|LJGI|TC75680 similar to UniRef100_A7Q0A9 Cluster: Chromosome... 726 0.0
gnl|LJGI|DC594749 similar to UniRef100_A7Q0A9 Cluster: Chromosom... 216 2e-55
gnl|LJGI|TC76693 161 9e-39
>gnl|LJGI|GO023748 similar to UniRef100_A7Q0A9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 708
Score = 1332 bits (672), Expect = 0.0
Identities = 678/680 (99%)
Strand = Plus / Plus
Query: 1 atggaaaccagtacggccatggatatcgaggaacaaccttcaccaccgacacccaacaac 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 29 atggaaaccagtacggccatgggtatcgaggaacaaccttcaccaccgacacccaacaac 88
Query: 61 gttaaacgctttggactcaaaaattctattcaaactaacttcggcgacgactatgttttc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gttaaacgctttggacccaaaaattctattcaaactaacttcggcgacgactatgttttc 148
Query: 121 caaatcattccaaaggatgattggactgcaatggcggtttcattgtcaacgaacgcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caaatcattccaaaggatgattggactgcaatggcggtttcattgtcaacgaacgcagtg 208
Query: 181 aaactgtattcacctgttgctggtcaatactatggagacttcaagggccactcttcaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aaactgtattcacctgttgctggtcaatactatggagacttcaagggccactcttcaacc 268
Query: 241 atcaaccagattttgttttcaggtccttccaatccccatgttctcaactcgtgttcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atcaaccagattttgttttcaggtccttccaatccccatgttctcaactcgtgttcttca 328
Query: 301 gatggcactattagagcttgggacacgcgaacatttcagcaggtttctacaattgatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatggcactattagagcttgggacacgcgaacatttcagcaggtttctacaattgatgct 388
Query: 361 ggtccttctcaagaggtcttcagcatttctcttggagggcctaatgggaatttgattgcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggtccttctcaagaggtcttcagcatttctcttggagggcctaatgggaatttgattgcg 448
Query: 421 gctggttgtaaatcgaagatactcttctgggattggagaaataggaagcaaattgcatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gctggttgtaaatcgaagatactcttctgggattggagaaataggaagcaaattgcatgc 508
Query: 481 ctggaagactctcatgtggaagatgtcactcaggttcattttgtccctgatgaacgaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ctggaagactctcatgtggaagatgtcactcaggttcattttgtccctgatgaacgaggc 568
Query: 541 aagcttatttctgcttcagaagatggtttgatctgcacatttgataccacgggagatatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagcttatttctgcttcagaagatggtttgatctgcacatttgataccacgggagatatc 628
Query: 601 aatgatgatgatcatctagagtcagtgattaatgtgggaacttccattgccaaggtaggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aatgatgatgatcatctagagtcagtgattaatgtgggaacttccattgccaaggtaggg 688
Query: 661 ctttttggagagagttatca 680
||||||||||||||||||||
Sbjct: 689 ctttttggagagagttatca 708
>gnl|LJGI|TC75680 similar to UniRef100_A7Q0A9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 911
Score = 726 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Plus
Query: 483 ggaagactctcatgtggaagatgtcactcaggttcattttgtccctgatgaacgaggcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaagactctcatgtggaagatgtcactcaggttcattttgtccctgatgaacgaggcaa 61
Query: 543 gcttatttctgcttcagaagatggtttgatctgcacatttgataccacgggagatatcaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gcttatttctgcttcagaagatggtttgatctgcacatttgataccacgggagatatcaa 121
Query: 603 tgatgatgatcatctagagtcagtgattaatgtgggaacttccattgccaaggtagggct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgatgatgatcatctagagtcagtgattaatgtgggaacttccattgccaaggtagggct 181
Query: 663 ttttggagagagttatcagaagctttggtgtttaacgcatattgaaaccttgggtgtctg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttttggagagagttatcagaagctttggtgtttaacgcatattgaaaccttgggtgtctg 241
Query: 723 ggactggaaagatggtagaaatgaagtgaacttctcagatgctcgtactttagcttctga 782
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggactgggaagatggtagaaatgaagtgaacttctcagatgctcgtactttagcttctga 301
Query: 783 gagttggaatttggatcatgttgactattttgttgattgccattactccaaagaagctga 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagttggaatttggatcatgttgactattttgttgattgccattactccaaagaagctga 361
Query: 843 aaaactatgg 852
||||||||||
Sbjct: 362 aaaactatgg 371
>gnl|LJGI|DC594749 similar to UniRef100_A7Q0A9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 477
Score = 216 bits (109), Expect = 2e-55
Identities = 112/113 (99%)
Strand = Plus / Plus
Query: 512 aggttcattttgtccctgatgaacgaggcaagcttatttctgcttcagaagatggtttga 571
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 276 aggttcattttgtccctgatgaacgaggctagcttatttctgcttcagaagatggtttga 335
Query: 572 tctgcacatttgataccacgggagatatcaatgatgatgatcatctagagtca 624
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tctgcacatttgataccacgggagatatcaatgatgatgatcatctagagtca 388
>gnl|LJGI|TC76693
Length = 581
Score = 161 bits (81), Expect = 9e-39
Identities = 91/93 (97%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 625 gtgattaatgtgggaacttccattgccaaggta-gggctttttggagagagttatcagaa 683
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 244 gtgattaatgtgggaacttccattgcccaggtacgggctttttggagagagttatcagaa 303
Query: 684 gctttggtgtttaacgcatattgaaaccttggg 716
|||||||||||||||||||||||||||||||||
Sbjct: 304 gctttggtgtttaacgcatattgaaaccttggg 336